RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 OR10G3Q8NGC4 313 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 SPPL2AQ8TCT8 520 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 DIO2Q92813 273 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 SLC35A4Q96G79 324 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 ZNF597Q96LX8 424 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 COL21A1Q96P44 957 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 TAAR6Q96RI8 345 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 DOHHQ9BU89 302 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 HES7Q9BYE0 225 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 TRIM4Q9C037 500 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 RMND5AQ9H871 391 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 METTL7AQ9H8H3 244 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 SH2D2AQ9NP31 389 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 EQTNQ9NQ60 294 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 GIN1Q9NXP7 522 aa13.48□□□□□ -0.25
LIMS3-205ENST00000487150 CHCHD2Q9Y6H1 151 aaPredicted RBP13.48□□□□□ -0.25
LIMS3-205ENST00000487150 WISP1O95388 367 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 PGRP06401 933 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 VIMP08670 466 aaKnown RBP13.47□□□□□ -0.25
LIMS3-205ENST00000487150 ALOX5P09917 674 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 CT45A8P0DMV1 189 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 CT45A9P0DMV2 189 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 CCL3P10147 92 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 ELAVL4P26378 380 aaKnown RBP13.47□□□□□ -0.25
LIMS3-205ENST00000487150 CCT3P49368 545 aaKnown RBP13.47□□□□□ -0.25
LIMS3-205ENST00000487150 ATP4BP51164 291 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 PRKAG1P54619 331 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 PSG6Q00889 435 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 CT45A2Q5DJT8 189 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 SPANXN4Q5MJ08 99 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 ZNF324BQ6AW86 544 aaPredicted RBP13.47□□□□□ -0.25
LIMS3-205ENST00000487150 OR4F3Q6IEY1 312 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 MFSD12Q6NUT3 480 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 PAOXQ6QHF9 649 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 PACS2Q86VP3 889 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 OR4A15Q8NGL6 344 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 JADE3Q92613 823 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 HOXB13Q92826 284 aaPredicted RBP13.47□□□□□ -0.25
LIMS3-205ENST00000487150 TMBIM1Q969X1 311 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 FAM120BQ96EK7 910 aaKnown RBP13.47□□□□□ -0.25
LIMS3-205ENST00000487150 OR52B2Q96RD2 323 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 STACQ99469 402 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 ANKRA2Q9H9E1 313 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 IL1RL2Q9HB29 575 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 NPHS2Q9NP85 383 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 DUSP22Q9NRW4 184 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 SIRT3Q9NTG7 399 aaPredicted RBP13.47□□□□□ -0.25
LIMS3-205ENST00000487150 BTNL2Q9UIR0 455 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 CBLCQ9ULV8 474 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 CNTRLQ7Z7A1 2325 aa13.47□□□□□ -0.25
LIMS3-205ENST00000487150 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.25
LIMS3-205ENST00000487150 ANKUB1A6NFN9 424 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 DUXAA6NLW8 204 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 ZNF354AO60765 605 aaPredicted RBP13.46□□□□□ -0.25
LIMS3-205ENST00000487150 REM1O75628 298 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 AGR2O95994 175 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 AK1P00568 194 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 ABCB1P08183 1280 aaPredicted RBP13.46□□□□□ -0.25
LIMS3-205ENST00000487150 PIGAP37287 484 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 MAGEA8P43361 318 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 MASP1P48740 699 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 CLK3P49761 638 aaKnown RBP13.46□□□□□ -0.25
LIMS3-205ENST00000487150 PNLIPRP2P54317 469 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 CORO7P57737 925 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 FBXW4P57775 412 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 GPR85P60893 370 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 UFM1P61960 85 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 HBA1P69905 142 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 SQLEQ14534 574 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 METTL21CQ5VZV1 264 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 TMEM198Q66K66 360 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 SLC30A6Q6NXT4 461 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 GHDCQ8N2G8 530 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 COX18Q8N8Q8 333 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 OR5M3Q8NGP4 307 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 GPR151Q8TDV0 419 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 SLC9A6Q92581 669 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 RILPQ96NA2 401 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 CCDC115Q96NT0 180 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 OR52E6Q96RD3 313 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 G6PC3Q9BUM1 346 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 OSBPL11Q9BXB4 747 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 ACTRT3Q9BYD9 372 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 QPCTLQ9NXS2 382 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 SEC14L3Q9UDX4 400 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.25
LIMS3-205ENST00000487150 ABCG2Q9UNQ0 655 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 NTNG1Q9Y2I2 539 aa13.46□□□□□ -0.25
LIMS3-205ENST00000487150 CFAP46Q8IYW2 2715 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 RNF103-CHMP3A0A140T963 221 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 FAM234BA2RU67 622 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 PRAMEF25A6NGN4 478 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 NKX2-2O95096 273 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 UQCRC2P22695 453 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 MDH1P40925 334 aaKnown RBP13.45□□□□□ -0.26
LIMS3-205ENST00000487150 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
LIMS3-205ENST00000487150 CASP6P55212 293 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 KCNK10P57789 538 aa13.45□□□□□ -0.26
LIMS3-205ENST00000487150 PPIAP62937 165 aaKnown RBP13.45□□□□□ -0.26
LIMS3-205ENST00000487150 LASP1Q14847 261 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms