RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 CYB561A3Q8NBI2 242 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 AKAP1Q92667 903 aaKnown RBP eCLIP11.66□□□□□ -0.548e-8■■□□□ 13.2
HSPG2-211ENST00000486901 MED30Q96HR3 178 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 MSLNLQ96KJ4 702 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 FCRL1Q96LA6 429 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 SPATA9Q9BWV2 254 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 GON7Q9BXV9 100 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 TMEM38AQ9H6F2 299 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 PPP1R3EQ9H7J1 279 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 HMX1Q9NP08 348 aaPredicted RBP11.66□□□□□ -0.54
HSPG2-211ENST00000486901 FLVCR2Q9UPI3 526 aa11.66□□□□□ -0.54
HSPG2-211ENST00000486901 ALPK3Q96L96 1907 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 CCL16O15467 120 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 OR1F1O43749 312 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 SERPINI2O75830 405 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 MT-ND4P03905 459 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 CTSLP07711 333 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 CPEP16870 476 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 UQCRC2P22695 453 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 ITGB7P26010 798 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 TRIM23P36406 574 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 SNRPGP62308 76 aaKnown RBP11.65□□□□□ -0.54
HSPG2-211ENST00000486901 COX10Q12887 443 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 TMEM215Q68D42 235 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 C12orf73Q69YU5 71 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 SHISA5Q8N114 240 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 ZNF655Q8N720 491 aaPredicted RBP11.65□□□□□ -0.54
HSPG2-211ENST00000486901 OR10H4Q8NGA5 316 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 OR11H7Q8NGC8 314 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 GLYATL1Q969I3 302 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
HSPG2-211ENST00000486901 SLC25A13Q9UJS0 675 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 RASD1Q9Y272 281 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 CHST2Q9Y4C5 530 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 IGLV3-16A0A075B6K0 115 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 WASH3PC4AMC7 463 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 E9PI62 339 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 C1QBP02746 253 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 KELP23276 732 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 SLC1A3P43003 542 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 EVX1P49640 407 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 PLBD1Q6P4A8 553 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 FAM83HQ6ZRV2 1179 aaPredicted RBP11.65□□□□□ -0.54
HSPG2-211ENST00000486901 GLRX5Q86SX6 157 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 CPOQ8IVL8 374 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 SLC43A3Q8NBI5 491 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 UXS1Q8NBZ7 420 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 OR56A3Q8NH54 315 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 TCEAL4Q96EI5 215 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 PDXPQ96GD0 296 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 TMEM43Q9BTV4 400 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 TMEM245Q9H330 911 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 OSGEPL1Q9H4B0 414 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 NLGN3Q9NZ94 848 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 SPG21Q9NZD8 308 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 DIMT1Q9UNQ2 313 aaKnown RBP11.65□□□□□ -0.54
HSPG2-211ENST00000486901 WNT6Q9Y6F9 365 aa11.65□□□□□ -0.54
HSPG2-211ENST00000486901 TP53BP1Q12888 1972 aaPredicted RBP11.65□□□□□ -0.55
HSPG2-211ENST00000486901 LEFTY2O00292 366 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 FAAHO00519 579 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 SMAD9O15198 467 aaKnown RBP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 MMP20O60882 483 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 CFDP00746 253 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 PTX3P26022 381 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 MAGEB1P43366 347 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 PXNP49023 591 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 NCBP2P52298 156 aaKnown RBP eCLIP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 OC90Q02509 493 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 FAAP20Q6NZ36 180 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 TMEM107Q6UX40 140 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 NPAS4Q8IUM7 802 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 SERPINA12Q8IW75 414 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 LRRC17Q8N6Y2 441 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 ANKRD53Q8N9V6 530 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 SMPDL3AQ92484 453 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 AP3S1Q92572 193 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 WDFY2Q96P53 400 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 THAP7Q9BT49 309 aaPredicted RBP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 BRF2Q9HAW0 419 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 ATP13A2Q9NQ11 1180 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 INSL5Q9Y5Q6 135 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 DSPPQ9NZW4 1301 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 PSMD9O00233 223 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 SSNA1O43805 119 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 POP7O75817 140 aaKnown RBP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 CLUP10909 449 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 NTRK2Q16620 822 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 SLC25A35Q3KQZ1 300 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 NXPE4Q6UWF7 544 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 KANSL1Q7Z3B3 1105 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 NRMQ8IXM6 262 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 GANCQ8TET4 914 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 ZNF354BQ96LW1 612 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 ABHD1Q96SE0 405 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 MAN2C1Q9NTJ4 1040 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 GLTPQ9NZD2 209 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 SCML1Q9UN30 329 aa11.64□□□□□ -0.55
HSPG2-211ENST00000486901 SF3B6Q9Y3B4 125 aaKnown RBP11.64□□□□□ -0.55
HSPG2-211ENST00000486901 TRIOO75962 3097 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms