RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 ASF1AQ9Y294 204 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 PADI2Q9Y2J8 665 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 TPRKBQ9Y3C4 175 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 HEBP2Q9Y5Z4 205 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 DOCK6Q96HP0 2047 aa7.28□□□□□ -1.24
SNX13-208ENST00000482558 C1orf226A1L170 272 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 M0QX08 132 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 F2RL2O00254 374 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 HS6ST1O60243 411 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 ZNF682O95780 498 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 C9P02748 559 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 SEMG1P04279 462 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 HOXC4P09017 264 aaPredicted RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 GNAO1P09471 354 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 SPARCP09486 303 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 SLC35G4P0C7Q5 338 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 LAMP1P11279 417 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 BTF3P20290 206 aaKnown RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 UQCRC2P22695 453 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 EEF1B2P24534 225 aaKnown RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 IGFBP5P24593 272 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 DCKP27707 260 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 PBLDP30039 288 aaPredicted RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 TRIM23P36406 574 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 CDKN2CP42773 168 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 ANXA11P50995 505 aaKnown RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 RPS21P63220 83 aaKnown RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 RAE1P78406 368 aaKnown RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 ABATP80404 500 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 CDK3Q00526 305 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 NTRK2Q16620 822 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 ITPRIPL2Q3MIP1 535 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 LRRC23Q53EV4 343 aaPredicted RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 TMEM35AQ53FP2 167 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 TCEAL5Q5H9L2 206 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 C6orf141Q5SZD1 244 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 GCNT6Q5T4J0 391 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 PIP5KL1Q5T9C9 394 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 ZNF691Q5VV52 312 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 FAM219BQ5XKK7 198 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 ZNF776Q68DI1 518 aaPredicted RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 FAM71E1Q6IPT2 247 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 SPESP1Q6UW49 350 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 TMC5Q6UXY8 1006 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 LINC00299Q6ZSB3 139 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 COMMD6Q7Z4G1 85 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 ANKRD46Q86W74 232 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 MMAAQ8IVH4 418 aaKnown RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 OR4A15Q8NGL6 344 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 C16orf78Q8WTQ4 265 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 RAB2BQ8WUD1 216 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 RASSF5Q8WWW0 418 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 SPSB4Q96A44 273 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 RSPRY1Q96DX4 576 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 FBXL20Q96IG2 436 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 EGLN2Q96KS0 407 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 MUS81Q96NY9 551 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 DOHHQ9BU89 302 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 C1orf43Q9BWL3 253 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 NPLQ9BXD5 320 aaPredicted RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 EBPLQ9BY08 206 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 WDR26Q9H7D7 661 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 MVB12BQ9H7P6 319 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 CXorf21Q9HAI6 301 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 MIEF1Q9NQG6 463 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 PPP1R14DQ9NXH3 145 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 SCN3BQ9NY72 215 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 TAS2R9Q9NYW1 312 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 SH3BP4Q9P0V3 963 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 FTSJ1Q9UET6 329 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 USP22Q9UPT9 525 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 ANGPT4Q9Y264 503 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 ITM2BQ9Y287 266 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 PCDHGB1Q9Y5G3 927 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 V9GYQ6 96 aa7.27□□□□□ -1.25
SNX13-208ENST00000482558 KIAA0100Q14667 2235 aaKnown RBP7.27□□□□□ -1.25
SNX13-208ENST00000482558 KIF26AQ9ULI4 1882 aaPredicted RBP7.26□□□□□ -1.25
SNX13-208ENST00000482558 MUC22E2RYF6 1773 aaPredicted RBP7.26□□□□□ -1.25
SNX13-208ENST00000482558 A0A0A6YYJ9 748 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 TMEM247A6NEH6 219 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 ARRDC5A6NEK1 342 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 H3BSA7 217 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 BCKDKO14874 412 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 PDE9AO76083 593 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 SEC24DO94855 1032 aaPredicted RBP7.26□□□□□ -1.25
SNX13-208ENST00000482558 OR6B1O95007 311 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 CA3P07451 260 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 HLA-EP13747 358 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 ANXA8P13928 327 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 DDCP20711 480 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 CRHBPP24387 322 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 ACVR2AP27037 513 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 NDUFS1P28331 727 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 OPRD1P41143 372 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 TSFMP43897 325 aaKnown RBP7.26□□□□□ -1.25
SNX13-208ENST00000482558 SLC26A5P58743 744 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 SELENOWP63302 87 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 C2orf80Q0P641 193 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 CNTN1Q12860 1018 aa7.26□□□□□ -1.25
SNX13-208ENST00000482558 AIMP2Q13155 320 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms