RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SLC26A1Q9H2B4 701 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 WDR54Q9H977 334 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 LRTM1Q9HBL6 345 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 TCF7L1Q9HCS4 588 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 LYRM4Q9HD34 91 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 FARSBQ9NSD9 589 aaKnown RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 NDE1Q9NXR1 346 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 HCN3Q9P1Z3 774 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 C19orf25Q9UFG5 118 aaPredicted RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 RSL24D1Q9UHA3 163 aaKnown RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ZDHHC2Q9UIJ5 367 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 HAO1Q9UJM8 370 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF225Q9UK10 706 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 EDARQ9UNE0 448 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 FARSAQ9Y285 508 aaKnown RBP5.8□□□□□ -1.48
SF3B1-209ENST00000479532 DNAJC15Q9Y5T4 150 aa5.8□□□□□ -1.48
SF3B1-209ENST00000479532 NUP210LQ5VU65 1888 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SCN3AQ9NY46 2000 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 A0A0G2JN53 185 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 LOC101059948A0A1B0GTJ6 334 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 A0A1B0GTL3 188 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TEX51A0A1B0GUA7 166 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 DYTNA2CJ06 578 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FUOMA2VDF0 154 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF860A6NHJ4 632 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 A8MUI8 341 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PEX12O00623 359 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PIP5K1BO14986 540 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 HDAC3O15379 428 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 CHST10O43529 356 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FOXS1O43638 330 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TLX3O43711 291 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 AKAP8O43823 692 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PCDH7O60245 1069 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SEC22BO75396 215 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SCELO95171 688 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TGDSO95455 350 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 MPIG6BO95866 241 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 KLK1P06870 262 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FHP07954 510 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FAM58BPP0C7Q3 252 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 LINC00032P0C843 101 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 KITP10721 976 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PRPH2P23942 346 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ATP5A1P25705 553 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 CERS1P27544 350 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 EIF2S3P41091 472 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 XCR1P46094 333 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 HTR6P50406 440 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 CDK9P50750 372 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ARFIP2P53365 341 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 MAPK12P53778 367 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TRA2BP62995 288 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 HMGCS1Q01581 520 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ALDH6A1Q02252 535 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ROM1Q03395 351 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SLAMF1Q13291 335 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 BIKQ13323 160 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 APOFQ13790 326 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 MLC1Q15049 377 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 UGT8Q16880 541 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SMU1Q2TAY7 513 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 CR1LQ2VPA4 569 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 MINDY4Q4G0A6 757 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 DNAL1Q4LDG9 190 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FAM199XQ6PEV8 388 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TUBA3EQ6PEY2 450 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SCIMPQ6UWF3 145 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FAM198BQ6UWH4 519 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 CD300LDQ6UXZ3 194 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF517Q6ZMY9 492 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PRSS41Q7RTY9 318 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TIPARPQ7Z3E1 657 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 COMMD6Q7Z4G1 85 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 GPR180Q86V85 440 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PROSER1Q86XN7 944 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 PDSS2Q86YH6 399 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ZNF595Q8IYB9 648 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FAM9CQ8IZT9 166 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 CA13Q8N1Q1 262 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 KIF2BQ8N4N8 673 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 C1orf52Q8N6N3 182 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ACOT4Q8N9L9 421 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SLC38A9Q8NBW4 561 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TNIP2Q8NFZ5 429 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 OR7G1Q8NGA0 311 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 STT3BQ8TCJ2 826 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TBC1D20Q96BZ9 403 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 TUBGCP3Q96CW5 907 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 IP6K3Q96PC2 410 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 CCNL2Q96S94 520 aaPredicted RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 HBEGFQ99075 208 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SORT1Q99523 831 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 FOXB1Q99853 325 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 CRB3Q9BUF7 120 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 MRPL1Q9BYD6 325 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 NUF2Q9BZD4 464 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 ACTL8Q9H568 366 aa5.79□□□□□ -1.48
SF3B1-209ENST00000479532 DDX31Q9H8H2 851 aaKnown RBP5.79□□□□□ -1.48
SF3B1-209ENST00000479532 SYNPO2LQ9H987 977 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms