RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 UTS2RQ9UKP6 389 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 CBLCQ9ULV8 474 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 MMACHCQ9Y4U1 282 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 PCDHA9Q9Y5H5 950 aa13.39□□□□□ -0.27
USP11-207ENST00000478596 C9JVG2 144 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 PDPK1O15530 556 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 NME2P1O60361 137 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 CCDC22O60826 627 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 LDB3O75112 727 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 SLC22A3O75751 556 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 DCTN3O75935 186 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 PCSK2P16519 638 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 MAOAP21397 527 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 NME2P22392 152 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 HNRNPFP52597 415 aaKnown RBP13.38□□□□□ -0.27
USP11-207ENST00000478596 PLIN5Q00G26 463 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 EMC4Q5J8M3 183 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 FAM71E1Q6IPT2 247 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 KRTCAP2Q8N6L1 136 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 TMEM158Q8WZ71 300 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 TANKQ92844 425 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 NPAS2Q99743 824 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 VN1R1Q9GZP7 353 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 REEP4Q9H6H4 257 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 PLEKHF2Q9H8W4 249 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 PRDM9Q9NQV7 894 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 PLSCR2Q9NRY7 297 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 C19orf25Q9UFG5 118 aaPredicted RBP13.38□□□□□ -0.27
USP11-207ENST00000478596 WBP11Q9Y2W2 641 aaKnown RBP13.38□□□□□ -0.27
USP11-207ENST00000478596 CAPN7Q9Y6W3 813 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 CUBNO60494 3623 aa13.38□□□□□ -0.27
USP11-207ENST00000478596 MYOCOSA0A1B0GUC4 107 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 CYR61O00622 381 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 DYRK3O43781 588 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 FGF17O60258 216 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 C8orf89P0DMQ9 161 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 CD53P19397 219 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 ZFP36L2P47974 494 aaKnown RBP13.37□□□□□ -0.27
USP11-207ENST00000478596 ATP4BP51164 291 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 HSD17B7P56937 341 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 UFM1P61960 85 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 IRX1P78414 480 aaPredicted RBP13.37□□□□□ -0.27
USP11-207ENST00000478596 OC90Q02509 493 aaPredicted RBP13.37□□□□□ -0.27
USP11-207ENST00000478596 NSDHLQ15738 373 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 MAPKAPK3Q16644 382 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 SLC25A35Q3KQZ1 300 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 FLYWCH1Q4VC44 716 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 AGKQ53H12 422 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 CPTPQ5TA50 214 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 METTL21CQ5VZV1 264 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 SLC48A1Q6P1K1 146 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 ARHGAP11AQ6P4F7 1023 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 QSOX2Q6ZRP7 698 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 SZRD1Q7Z422 152 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 OR4N5Q8IXE1 308 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 TMEM52Q8NDY8 209 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 OR4K14Q8NGD5 310 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 ZFP28Q8NHY6 868 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 TSLPQ969D9 159 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 C11orf24Q96F05 449 aaPredicted RBP13.37□□□□□ -0.27
USP11-207ENST00000478596 DGAT2Q96PD7 388 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 BDH2Q9BUT1 245 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 BRINP2Q9C0B6 783 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 PNO1Q9NRX1 252 aaKnown RBP13.37□□□□□ -0.27
USP11-207ENST00000478596 ZIM2Q9NZV7 527 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 GPR45Q9Y5Y3 372 aa13.37□□□□□ -0.27
USP11-207ENST00000478596 SYNDIG1LA6NDD5 238 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 GABRR3A8MPY1 467 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 FCHO1O14526 889 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 TFECO14948 347 aaPredicted RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 PGRMC2O15173 223 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 CFLARO15519 480 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 SLC25A12O75746 678 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 TNNI3P19429 210 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 S100A3P33764 101 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 GPC1P35052 558 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 SOAT1P35610 550 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 FEN1P39748 380 aaKnown RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 EFNA3P52797 238 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 CLDN8P56748 225 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 OR4D2P58180 307 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 BTG2P78543 158 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 SNTB1Q13884 538 aaKnown RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 SERTAD2Q14140 314 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 DPY19L1Q2PZI1 675 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 BTBD16Q32M84 506 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 FAM174BQ3ZCQ3 159 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 TIGD2Q4W5G0 525 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 CMPK2Q5EBM0 449 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 Q5PR19 223 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 PAOXQ6QHF9 649 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 C16orf47Q6ZP98 133 aaPredicted RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 CXorf67Q86X51 503 aaPredicted RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 SAMD14Q8IZD0 417 aaPredicted RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 SHISA5Q8N114 240 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 LRRC25Q8N386 305 aaPredicted RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 GLB1L3Q8NCI6 653 aaPredicted RBP13.36□□□□□ -0.27
USP11-207ENST00000478596 OR7A2PQ8NGA2 310 aa13.36□□□□□ -0.27
USP11-207ENST00000478596 OR9I1Q8NGQ6 314 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms