RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 LOC100509620A0A075B734 347 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 KCNE1BA0A087WTH5 132 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 CARNS1A5YM72 827 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 HOXC11O43248 304 aaPredicted RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 FCMRO60667 390 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 OR2B3O76000 313 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 PRNPP04156 253 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 RHCEP18577 417 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 ELAVL4P26378 380 aaKnown RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 KRR1Q13601 381 aaKnown RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 KCNC3Q14003 757 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 POU4F3Q15319 338 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 FXNQ16595 210 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 FAM205BPQ63HN1 556 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 FAHD1Q6P587 224 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 METAP1DQ6UB28 335 aaPredicted RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 ZNF367Q7RTV3 350 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 PHC2Q8IXK0 858 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 IL17RDQ8NFM7 739 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 OR5H6Q8NGV6 325 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 NXPE3Q969Y0 559 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 SAMD8Q96LT4 415 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 SLC38A2Q96QD8 506 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 GPA33Q99795 319 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 BCL7BQ9BQE9 202 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 IFT27Q9BW83 186 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 ZNF717Q9BY31 904 aaPredicted RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 INSL6Q9Y581 213 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 DOCK9Q9BZ29 2069 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 TP53BP1Q12888 1972 aaPredicted RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 MEIS3P1A6NDR6 274 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 LCMT2O60294 686 aaKnown RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 SLCO2B1O94956 709 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 EFEMP2O95967 443 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 TIMP1P01033 207 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 PRKAR1AP10644 381 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 CLUP10909 449 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 OSMP13725 252 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 MAGEA2P43356 314 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 SOX2P48431 317 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 VEZF1Q14119 521 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 ZNF630Q2M218 657 aaPredicted RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 HENMT1Q5T8I9 393 aaKnown RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 PRSS45Q7RTY3 260 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 ZER1Q7Z7L7 766 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 OR14C36Q8NHC7 312 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 SUN5Q8TC36 379 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 SPRYD4Q8WW59 207 aaPredicted RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 DEDD2Q8WXF8 326 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 OR2A14Q96R47 310 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 ABCG5Q9H222 651 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 MRPL39Q9NYK5 338 aaKnown RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 EIF3KQ9UBQ5 218 aaKnown RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 FNDC1Q4ZHG4 1894 aaPredicted RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 A0A0G2JMP0 313 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 A0A0X1KG70 313 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 ISPDA4D126 451 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 TRIM64A6NGJ6 449 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 GRXCR1A8MXD5 290 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 ADH1CP00326 375 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 PYCR1P32322 319 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 MAP2K3P46734 347 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 GCGRP47871 477 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 MTNR1AP48039 350 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 GPLD1P80108 840 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 FAAP20Q6NZ36 180 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 C12orf40Q86WS4 652 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 NKAIN4Q8IVV8 208 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 GPR32P1Q8NGA4 272 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 OR4M2Q8NGB6 313 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 LMLNQ96KR4 655 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 CTRCQ99895 268 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 DPCDQ9BVM2 203 aaPredicted RBP9.2□□□□□ -0.94
CMC1-209ENST00000477739 C1GALT1Q9NS00 363 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 MAFFQ9ULX9 164 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 ALG5Q9Y673 324 aa9.2□□□□□ -0.94
CMC1-209ENST00000477739 INMT-MINDY4F8WBC2 141 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 GIPRP48546 466 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TGM3Q08188 693 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 E2F2Q14209 437 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 SUZ12Q15022 739 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 LILRA6Q6PI73 481 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 COMTD1Q86VU5 262 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 ARL14Q8N4G2 192 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 MRPL43Q8N983 215 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 DENND6BQ8NEG7 585 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 POP5Q969H6 163 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 ZBED6CLQ96FA7 236 aaPredicted RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 MSANTD3Q96H12 275 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 MAPKAP1Q9BPZ7 522 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 EFCAB11Q9BUY7 163 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 ISG20L2Q9H9L3 353 aaKnown RBP9.19□□□□□ -0.94
CMC1-209ENST00000477739 ATP13A2Q9NQ11 1180 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 STUB1Q9UNE7 303 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 LAMA1P25391 3075 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TRAV27A0A087WT01 109 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3DA0A087WVF3 549 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3IA0A087WXS9 549 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3EA0A087X179 549 aa9.19□□□□□ -0.94
CMC1-209ENST00000477739 TBC1D3KA0A087X1G2 549 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms