RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 MKS1Q9NXB0 559 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 TUBA8Q9NY65 449 aaPredicted RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 UTP6Q9NYH9 597 aaKnown RBP4.2□□□□□ -1.74
CKS1B-207ENST00000477676 BFARQ9NZS9 450 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ADAM21Q9UKJ8 722 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 FBXW2Q9UKT8 454 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 PKD1L1Q8TDX9 2849 aa4.2□□□□□ -1.74
CKS1B-207ENST00000477676 ATP6AP2A0A1C7CYW4 349 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CTAGE9A4FU28 777 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 FAM171A2A8MVW0 826 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 FCHO1O14526 889 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 BANF1O75531 89 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 ATP6AP2O75787 350 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 ETHE1O95571 254 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 ELANEP08246 267 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 SLC35G6P0C7Q6 338 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 RNH1P13489 461 aaKnown RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 ENO3P13929 434 aaPredicted RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CD53P19397 219 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CNR1P21554 472 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 DNASE1P24855 282 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CEACAM8P31997 349 aaPredicted RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 AHRP35869 848 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 PIGAP37287 484 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 VPS41P49754 854 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF81P51508 661 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 SSR4P51571 173 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CCR8P51685 355 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CLCN2P51788 898 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF136P52737 540 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 DHX34Q14147 1143 aaKnown RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 DAZAP2Q15038 168 aaPredicted RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 HYAL4Q2M3T9 481 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 DEFB113Q30KQ7 82 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 SLC25A35Q3KQZ1 300 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 TTLL9Q3SXZ7 439 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 FBXL19-AS1Q494R0 122 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 FLYWCH1Q4VC44 716 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 HSP90AA5PQ58FG0 334 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 TOR1AIP1Q5JTV8 583 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 C1orf185Q5T7R7 199 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 RIPPLY2Q5TAB7 128 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 TTC27Q6P3X3 843 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 SBSNQ6UWP8 590 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 DGAT2L6Q6ZPD8 337 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 C1QL2Q7Z5L3 287 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 WDR53Q7Z5U6 358 aaPredicted RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CLNKQ7Z7G1 428 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 BIVMQ86UB2 503 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 EID3Q8N140 333 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 FAM109AQ8N4B1 249 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 TMEM156Q8N614 296 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CCDC89Q8N998 374 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 TNIP2Q8NFZ5 429 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 LINC01560Q8TB33 94 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 DOK4Q8TEW6 326 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 RMND5BQ96G75 393 aaPredicted RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 VMP1Q96GC9 406 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 C18orf12Q96KH6 178 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 CAPZA3Q96KX2 299 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 WDR83Q9BRX9 315 aaKnown RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 FRMD8P1Q9BZ68 369 aaPredicted RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 TRIM5Q9C035 493 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 PCBD2Q9H0N5 130 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 KLK15Q9H2R5 256 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 MS4A5Q9H3V2 200 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 TSPY26PQ9H489 355 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 PARVBQ9HBI1 364 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 FBXO5Q9UKT4 447 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 EDARQ9UNE0 448 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 ERVK-11Q9UQG0 969 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 YARS2Q9Y2Z4 477 aaKnown RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 ATG4BQ9Y4P1 393 aa4.19□□□□□ -1.74
CKS1B-207ENST00000477676 HEATR1Q9H583 2144 aaKnown RBP4.19□□□□□ -1.74
CKS1B-207ENST00000477676 LRIT2A6NDA9 550 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 A8MVJ9 347 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 VSTM5A8MXK1 200 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 GOLGA8MH3BSY2 632 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 EIF3FO00303 357 aaPredicted RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 BCKDKO14874 412 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 WDR1O75083 606 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ZFAND5O76080 213 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 LRATO95237 230 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 IL33O95760 270 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 AHSGP02765 367 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 RAF1P04049 648 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 HRGP04196 525 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 HEXAP06865 529 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 C8GP07360 202 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 SERPINA6P08185 405 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 PF4V1P10720 104 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 JAK1P23458 1154 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 CERS1P27544 350 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 UQCRC1P31930 480 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 ZNF75DP51815 510 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 AGFG1P52594 562 aaKnown RBP4.18□□□□□ -1.74
CKS1B-207ENST00000477676 DGKQP52824 942 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 BTN3A2P78410 334 aa4.18□□□□□ -1.74
CKS1B-207ENST00000477676 CCZ1BP86790 482 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms