RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 OR52P1PQ8NH57 321 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 NAT6Q93015 286 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 UCN3Q969E3 161 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 SLC38A4Q969I6 547 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 COL26A1Q96A83 441 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ANKRD9Q96BM1 317 aaPredicted RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 OTUB1Q96FW1 271 aaPredicted RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 SLC35A4Q96G79 324 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 SLC41A2Q96JW4 573 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 TGM7Q96PF1 710 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 CSF3RQ99062 836 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ARHGDIGQ99819 225 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 BCL7BQ9BQE9 202 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 LMF2Q9BU23 707 aaKnown RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 PRRG3Q9BZD7 231 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 UCK2Q9BZX2 261 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ZNF350Q9GZX5 532 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 KLHL25Q9H0H3 589 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 ADNPQ9H2P0 1102 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 CXorf21Q9HAI6 301 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PRTFDC1Q9NRG1 225 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PLCXD1Q9NUJ7 323 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 C14orf105Q9NVL8 296 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PTTG2Q9NZH5 202 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 MAT2BQ9NZL9 334 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PRODH2Q9UF12 536 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 RSL24D1Q9UHA3 163 aaKnown RBP7.42□□□□□ -1.22
VMA21-203ENST00000477649 SERTAD3Q9UJW9 196 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 SRPK3Q9UPE1 567 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 CFL2Q9Y281 166 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 PCDHGB5Q9Y5G0 923 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 SLCO1B1Q9Y6L6 691 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 RNF215Q9Y6U7 377 aa7.42□□□□□ -1.22
VMA21-203ENST00000477649 FANCMQ8IYD8 2048 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 A0A1B0GTQ1 180 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 A0A1B0GVT2 93 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 SH3PXD2BA1X283 911 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 HTR3EA5X5Y0 456 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 PRAMEF25A6NGN4 478 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 AGAP5A6NIR3 686 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 SGK494L7N484 410 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 SLC1A7O00341 560 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 TERTO14746 1132 aaKnown RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 FOXS1O43638 330 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 PRAMEF2O60811 474 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 RDH16O75452 317 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 NKX2-2O95096 273 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 OR5F1O95221 314 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 CLIC3O95833 236 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 RECKO95980 971 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 ANKRD34CP0C6C1 535 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 OSMP13725 252 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 RPS4Y1P22090 263 aaKnown RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 EPHA8P29322 1005 aaPredicted RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 ALDH4A1P30038 563 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 KRT20P35900 424 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 STT3AP46977 705 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 FNTBP49356 437 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 CLK3P49761 638 aaKnown RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 PPP1CAP62136 330 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 POU6F2P78424 691 aaPredicted RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 IL1RL1Q01638 556 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 ACY1Q03154 408 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 CHRNEQ04844 493 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 MGAT2Q10469 447 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 FUT5Q11128 374 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 SLC13A2Q13183 592 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 RAPSNQ13702 412 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 MAD2L1BPQ15013 274 aaPredicted RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 NR0B2Q15466 257 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 LTB4RQ15722 352 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 ZNF750Q32MQ0 723 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 B3GNT6Q6ZMB0 384 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 LIAT1Q6ZQX7 453 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 GALNT5Q7Z7M9 940 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 RANBP3LQ86VV4 465 aaPredicted RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 BPHLQ86WA6 291 aaPredicted RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 ZNF761Q86XN6 746 aaPredicted RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 CMIPQ8IY22 773 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 COX18Q8N8Q8 333 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 AQP11Q8NBQ7 271 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 SLC16A11Q8NCK7 471 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 OR9A4Q8NGU2 314 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 SLC9A6Q92581 669 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 FCGR1BQ92637 280 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 KAT2AQ92830 837 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 EDAQ92838 391 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 RIT1Q92963 219 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 C16orf58Q96GQ5 468 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 ZC3H10Q96K80 434 aaKnown RBP7.41□□□□□ -1.22
VMA21-203ENST00000477649 ART5Q96L15 291 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 Q96MT0 163 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 DGAT2Q96PD7 388 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 NODALQ96S42 347 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 SDF2Q99470 211 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 FUZQ9BT04 418 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 G6PC3Q9BUM1 346 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 TEX12Q9BXU0 123 aa7.41□□□□□ -1.22
VMA21-203ENST00000477649 RBM38Q9H0Z9 239 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms