RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 IFT88Q13099 833 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 ACAP2Q15057 778 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 LTB4RQ15722 352 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 UAP1Q16222 522 aaPredicted RBP12.68□□□□□ -0.38
CCDC78-209ENST00000474647 SGO1Q5FBB7 561 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 OR5M10Q6IEU7 315 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 SLC48A1Q6P1K1 146 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 VWA1Q6PCB0 445 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 CHMP1BQ7LBR1 199 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 PLCZ1Q86YW0 608 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 IFT20Q8IY31 132 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 UBQLNLQ8IYU4 475 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 PTGR2Q8N8N7 351 aaPredicted RBP12.68□□□□□ -0.38
CCDC78-209ENST00000474647 FBXO25Q8TCJ0 367 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 TMBIM1Q969X1 311 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 TMCO6Q96DC7 493 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 ZC3HAV1LQ96H79 300 aaKnown RBP12.68□□□□□ -0.38
CCDC78-209ENST00000474647 WFIKKN1Q96NZ8 548 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 UCN2Q96RP3 112 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 PIP5K1AQ99755 562 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 PFDN4Q9NQP4 134 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 ZDHHC18Q9NUE0 388 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 PSD3Q9NYI0 1048 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 FBXL2Q9UKC9 423 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 PCDHA9Q9Y5H5 950 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 TNPO3Q9Y5L0 923 aaKnown RBP12.68□□□□□ -0.38
CCDC78-209ENST00000474647 WIF1Q9Y5W5 379 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 CSPG4Q6UVK1 2322 aa12.68□□□□□ -0.38
CCDC78-209ENST00000474647 ROS1P08922 2347 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 FRG2CA6NGY1 282 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 SLC22A20A6NK97 555 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 DEFB108AA8MXU0 73 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 INAFM1C9JVW0 142 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 MSTNO14793 375 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 GUCY1B2O75343 617 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 REM1O75628 298 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 KLHL2O95198 593 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 CBX7O95931 251 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 ATP1B1P05026 303 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 ZNF708P17019 499 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 CSNK2A2P19784 350 aaPredicted RBP12.67□□□□□ -0.38
CCDC78-209ENST00000474647 FPR1P21462 350 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 IL12BP29460 328 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 SRD5A2P31213 254 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 PLTPP55058 493 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 EEF1A1P68104 462 aaKnown RBP12.67□□□□□ -0.38
CCDC78-209ENST00000474647 HMGCS1Q01581 520 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 DUSP2Q05923 314 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 MGAT2Q10469 447 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 MAP4K2Q12851 820 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 NAB1Q13506 487 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 TRMT12Q53H54 448 aaKnown RBP12.67□□□□□ -0.38
CCDC78-209ENST00000474647 EEF1A1P5Q5VTE0 462 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 FRG2Q64ET8 278 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 ZNF550Q7Z398 422 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 COMMD6Q7Z4G1 85 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 CTHRC1Q96CG8 243 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 PHF21BQ96EK2 531 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 DTNBP1Q96EV8 351 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 PGM2Q96G03 612 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 COL21A1Q96P44 957 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 FRG2BQ96QU4 278 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 OPN3Q9H1Y3 402 aaPredicted RBP12.67□□□□□ -0.38
CCDC78-209ENST00000474647 PRODH2Q9UF12 536 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.67□□□□□ -0.38
CCDC78-209ENST00000474647 ADAM29Q9UKF5 820 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 SLC12A4Q9UP95 1085 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 DLGAP4Q9Y2H0 992 aa12.67□□□□□ -0.38
CCDC78-209ENST00000474647 V9GYY5 206 aaPredicted RBP12.67□□□□□ -0.38
CCDC78-209ENST00000474647 FBN1P35555 2871 aaKnown RBP12.66□□□□□ -0.38
CCDC78-209ENST00000474647 A0A096LPK6 155 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 OR6C70A6NIJ9 312 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 POU2F1P14859 743 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 PCSK2P16519 638 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 KRT20P35900 424 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 CD79BP40259 229 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 MC3RP41968 323 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 MAGEA4P43358 317 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 PPICP45877 212 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 ACKR1Q16570 336 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 ERCC6LQ2NKX8 1250 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 OR2A2Q6IF42 318 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 CCDC91Q7Z6B0 441 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 METTL4Q8N3J2 472 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 EIF1ADQ8N9N8 165 aaKnown RBP12.66□□□□□ -0.38
CCDC78-209ENST00000474647 IFT81Q8WYA0 676 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 NSUN5Q96P11 429 aaKnown RBP12.66□□□□□ -0.38
CCDC78-209ENST00000474647 ADOQ96SZ5 270 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 PIGQQ9BRB3 760 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 REPIN1Q9BWE0 567 aaKnown RBP12.66□□□□□ -0.38
CCDC78-209ENST00000474647 VPS11Q9H270 941 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 ELOVL6Q9H5J4 265 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 ANKRA2Q9H9E1 313 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 ZNF639Q9UID6 485 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 CES1P1Q9UKY3 287 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 ZNF780BQ9Y6R6 833 aa12.66□□□□□ -0.38
CCDC78-209ENST00000474647 PRR14LQ5THK1 2151 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 SEC14L5O43304 696 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 HCRTR2O43614 444 aa12.65□□□□□ -0.38
CCDC78-209ENST00000474647 NME6O75414 186 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms