RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PRPS1L1P21108 318 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 ABCD3P28288 659 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 NTSP30990 170 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 HPCAL1P37235 193 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 MAP3K8P41279 467 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 PPICP45877 212 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 IDH3AP50213 366 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 PSG6Q00889 435 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 MLC1Q15049 377 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 NTRK2Q16620 822 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 GSTA3Q16772 222 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 EIF2S3LQ2VIR3 472 aaKnown RBP12.06□□□□□ -0.48
TPM3-216ENST00000473036 LSM12Q3MHD2 195 aaKnown RBP12.06□□□□□ -0.48
TPM3-216ENST00000473036 EXOSC6Q5RKV6 272 aaKnown RBP12.06□□□□□ -0.48
TPM3-216ENST00000473036 CPTPQ5TA50 214 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 ZNF787Q6DD87 383 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 OR4F3Q6IEY1 312 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 OPN5Q6U736 354 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 R3HCC1LQ7Z5L2 792 aaKnown RBP12.06□□□□□ -0.48
TPM3-216ENST00000473036 SIAH3Q8IW03 269 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 GPALPP1Q8IXQ4 340 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 CLECL1Q8IZS7 167 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 SLC15A4Q8N697 577 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 OR5M3Q8NGP4 307 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 PRR7Q8TB68 274 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 HOXB13Q92826 284 aaPredicted RBP12.06□□□□□ -0.48
TPM3-216ENST00000473036 LCORQ96JN0 433 aaPredicted RBP12.06□□□□□ -0.48
TPM3-216ENST00000473036 BTBD9Q96Q07 612 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 FAM107BQ9H098 131 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 CXorf36Q9H7Y0 433 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 ACSS1Q9NUB1 689 aaPredicted RBP12.06□□□□□ -0.48
TPM3-216ENST00000473036 DCTN4Q9UJW0 460 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 CNOT11Q9UKZ1 510 aaKnown RBP12.06□□□□□ -0.48
TPM3-216ENST00000473036 HRH3Q9Y5N1 445 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 NPFFR2Q9Y5X5 522 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 PCNX3Q9H6A9 2034 aa12.06□□□□□ -0.48
TPM3-216ENST00000473036 GTF3C1Q12789 2109 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 DNAJC13O75165 2243 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 B4DXG7 233 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 TO15178 435 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 C6orf47O95873 294 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 ABCB1P08183 1280 aaPredicted RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 IDO1P14902 403 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 DRD5P21918 477 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 ADSLP30566 484 aaPredicted RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 PIGAP37287 484 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 MEOX1P50221 254 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 MANFP55145 182 aaKnown RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 FOXO1Q12778 655 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 SPANXN4Q5MJ08 99 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 C6orf163Q5TEZ5 329 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 NXNQ6DKJ4 435 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 RTL4Q6ZR62 310 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 CHERPQ8IWX8 916 aaKnown RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 CLEC4FQ8N1N0 589 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 CCDC197Q8NCU1 140 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 PSMA8Q8TAA3 256 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 SLC22A8Q8TCC7 542 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 PAQR8Q8TEZ7 354 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 NR4A3Q92570 626 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 HGDQ93099 445 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 FAM120BQ96EK7 910 aaKnown RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 ZBED6CLQ96FA7 236 aaPredicted RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 THOC1Q96FV9 657 aaKnown RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 C16orf58Q96GQ5 468 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 DUSP26Q9BV47 211 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 BHLHE41Q9C0J9 482 aaPredicted RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 TSPAN10Q9H1Z9 355 aaPredicted RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 PRODH2Q9UF12 536 aa12.05□□□□□ -0.48
TPM3-216ENST00000473036 ERRFI1Q9UJM3 462 aaPredicted RBP12.05□□□□□ -0.48
TPM3-216ENST00000473036 A0A1W2PRB8 838 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 FRG2CA6NGY1 282 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 C17orf51A8MQB3 221 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 UBDO15205 165 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 SLC22A2O15244 555 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 TSPAN2O60636 221 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 UGT2B11O75310 529 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 ERN1O75460 977 aaKnown RBP12.04□□□□□ -0.48
TPM3-216ENST00000473036 BCAS2O75934 225 aaPredicted RBP12.04□□□□□ -0.48
TPM3-216ENST00000473036 GLSO94925 669 aaPredicted RBP12.04□□□□□ -0.48
TPM3-216ENST00000473036 IFI6P09912 130 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 RPL3P39023 403 aaKnown RBP12.04□□□□□ -0.48
TPM3-216ENST00000473036 PTGDSP41222 190 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 DNASE1L1P49184 302 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 DGKQP52824 942 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 STX1BP61266 288 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 HBA1P69905 142 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 CBX1P83916 185 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 GAB1Q13480 694 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 RPS6KA2Q15349 733 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 INAQ16352 499 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 PGS1Q32NB8 556 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 PRAMEF20Q5VT98 475 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 HLA-DQA1Q5Y7H0 255 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 CGB2Q6NT52 195 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 ANKRD46Q86W74 232 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 TAGAPQ8N103 731 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 HORMAD2Q8N7B1 307 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 BCORP1Q8N888 145 aa12.04□□□□□ -0.48
TPM3-216ENST00000473036 ZFP62Q8NB50 900 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms