RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 A8MVM7 634 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 TRAFD1O14545 582 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 LSM1O15116 133 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 SCAMP2O15127 329 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 BUB1O43683 1085 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CLN5O75503 358 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PAPSS2O95340 614 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 COL11A2P13942 1736 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 CD58P19256 250 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 IDSP22304 550 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 HPCAL1P37235 193 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CSRP3P50461 194 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 BCAP31P51572 246 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 MAZP56270 477 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 RPS27AP62979 156 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 OTUD4Q01804 1114 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 ID2Q02363 134 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 COL10A1Q03692 680 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 HYAL1Q12794 435 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 OR1C1Q15619 314 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 C3AR1Q16581 482 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 MPPE1Q53F39 396 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 MANEAQ5SRI9 462 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SPATA46Q5T0L3 261 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF776Q68DI1 518 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 TTC19Q6DKK2 380 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 SNRNP48Q6IEG0 339 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 TMEM207Q6UWW9 146 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PAQR9Q6ZVX9 377 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 TMCO2Q7Z6W1 182 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 PHLDB2Q86SQ0 1253 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 NBPF5PQ86XG9 351 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 CATSPERDQ86XM0 798 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 FAM9CQ8IZT9 166 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 RYBPQ8N488 228 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 EMG1Q92979 244 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 SLC47A1Q96FL8 570 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PRAC1Q96KF2 57 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CAPNS2Q96L46 248 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CHRDL1Q9BU40 450 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 MCRIP2Q9BUT9 160 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 IL25Q9H293 177 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SLITRK6Q9H5Y7 841 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 GDF3Q9NR23 364 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 OLFML3Q9NRN5 406 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 RAB20Q9NX57 234 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 C6orf203Q9P0P8 240 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 PAM16Q9Y3D7 125 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PALLDQ8WX93 1383 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 A0A1B0GTQ1 180 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 A0A1W2PR80 420 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 LINC01548A6NM66 108 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SUPT3HB4E1H0 165 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF195O14628 629 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 NVLO15381 856 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 SCO2O43819 266 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ANXA9O76027 345 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 LATS1O95835 1130 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 LYNP07948 512 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 HOXC6P09630 235 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 RALAP11233 206 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ANXA3P12429 323 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF20P17024 532 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 AHRP35869 848 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 GNL1P36915 607 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 CCT6AP40227 531 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 CDKN1BP46527 198 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SGSHP51688 502 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CRYBB1P53674 252 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 RPL24P83731 157 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 PLP2Q04941 152 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 EEF1A2Q05639 463 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 TMEM132DQ14C87 1099 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SYPL1Q16563 259 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PPP6R3Q5H9R7 873 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 SOHLH1Q5JUK2 328 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 LY6G6FQ5SQ64 297 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CELF3Q5SZQ8 465 aaKnown RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 C10orf25Q5T742 122 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SEL1L2Q5TEA6 688 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ECHDC2Q86YB7 292 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 CSNK1A1LQ8N752 337 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZNF114Q8NC26 417 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 THAP6Q8TBB0 222 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PPP4R1Q8TF05 950 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ZG16BQ96DA0 208 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 TIMD4Q96H15 378 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SH3YL1Q96HL8 342 aaPredicted RBP2.35□□□□□ -2.03
XRN1-210ENST00000472697 C2orf48Q96LS8 159 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 AMDHD1Q96NU7 426 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SLC38A2Q96QD8 506 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 C10orf88Q9H8K7 445 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 SLC17A5Q9NRA2 495 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 ACOXLQ9NUZ1 547 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 HIF1ANQ9NWT6 349 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 RNF14Q9UBS8 474 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PCSK1NQ9UHG2 260 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 PCDHAC2Q9Y5I4 1007 aa2.35□□□□□ -2.03
XRN1-210ENST00000472697 TRAV26-1A0A087WT03 109 aa2.34□□□□□ -2.03
XRN1-210ENST00000472697 IGLV5-52A0A0A0MRZ9 124 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms