RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 NEK2P51955 445 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 DSCR4P56555 118 aaPredicted RBP17.05■□□□□ 0.32
SORT1-203ENST00000471996 PHEXP78562 749 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 EXOSC7Q15024 291 aaKnown RBP17.05■□□□□ 0.32
SORT1-203ENST00000471996 TMBIM1Q969X1 311 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 SLC35A4Q96G79 324 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 KCNK17Q96T54 332 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 OR10A4Q9H209 315 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 CAB39LQ9H9S4 337 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 MOCS1Q9NZB8 636 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 MAT2BQ9NZL9 334 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 LPAR3Q9UBY5 353 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 ASIC3Q9UHC3 531 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 ZNF639Q9UID6 485 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 PLLPQ9Y342 182 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 RNF115Q9Y4L5 304 aa17.05■□□□□ 0.32
SORT1-203ENST00000471996 PHGDHO43175 533 aaKnown RBP17.04■□□□□ 0.32
SORT1-203ENST00000471996 SEC14L5O43304 696 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 NDUFS7O75251 213 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 REM1O75628 298 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 FNTAP49354 379 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 GAS1P54826 345 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 RUNX1T1Q06455 604 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.04■□□□□ 0.32
SORT1-203ENST00000471996 MYLK4Q86YV6 388 aaPredicted RBP17.04■□□□□ 0.32
SORT1-203ENST00000471996 OR4K17Q8NGC6 315 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 OR6K3Q8NGY3 331 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 LRRC39Q96DD0 335 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 RHNO1Q9BSD3 238 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 LRRC1Q9BTT6 524 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 BARX1Q9HBU1 254 aaPredicted RBP17.04■□□□□ 0.32
SORT1-203ENST00000471996 FANCFQ9NPI8 374 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 WHRNQ9P202 907 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 MTO1Q9Y2Z2 717 aaKnown RBP17.04■□□□□ 0.32
SORT1-203ENST00000471996 EMC9Q9Y3B6 208 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 ZNF337Q9Y3M9 751 aa17.04■□□□□ 0.32
SORT1-203ENST00000471996 A0A096LNT2 108 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 H0YIV9 168 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 AQP8O94778 261 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 CBX7O95931 251 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 FCGR2AP12318 317 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 IL11P20809 199 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 CLDN20P56880 219 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 ILF2Q12905 390 aaKnown RBP17.03■□□□□ 0.32
SORT1-203ENST00000471996 TMEM249Q2WGJ8 235 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 RAET1LQ5VY80 246 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 LIPJQ5W064 366 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 ZNF662Q6ZS27 426 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 UBTD2Q8WUN7 234 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 RNF138Q8WVD3 245 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 TSPAN17Q96FV3 270 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 HS6ST2Q96MM7 605 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 ADOQ96SZ5 270 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 STMN4Q9H169 189 aaPredicted RBP17.03■□□□□ 0.32
SORT1-203ENST00000471996 NSMCE4AQ9NXX6 385 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 NUDT4Q9NZJ9 180 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 PRODH2Q9UF12 536 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 GPR52Q9Y2T5 361 aa17.03■□□□□ 0.32
SORT1-203ENST00000471996 GPR55Q9Y2T6 319 aaPredicted RBP17.03■□□□□ 0.32
SORT1-203ENST00000471996 UQCRHLA0A096LP55 91 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 A0A1W2PP18 115 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 C17orf51A8MQB3 221 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 LINC01387J3KSC0 135 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 CLOCKO15516 846 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 ATP1B1P05026 303 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 HK1P19367 917 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 EMDP50402 254 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 RPS3AP61247 264 aaKnown RBP17.02■□□□□ 0.32
SORT1-203ENST00000471996 SRSF2Q01130 221 aaKnown RBP17.02■□□□□ 0.32
SORT1-203ENST00000471996 FAPQ12884 760 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 EFR3AQ14156 821 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 SLMAPQ14BN4 828 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 PGGHGQ32M88 737 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 DNAJC14Q6Y2X3 702 aaPredicted RBP17.02■□□□□ 0.32
SORT1-203ENST00000471996 BEND4Q6ZU67 534 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 METTL25Q8N6Q8 603 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 FADS6Q8N9I5 356 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 OR52R1Q8NGF1 315 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 STAG3L4Q8TBR4 150 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 GFM2Q969S9 779 aaKnown RBP17.02■□□□□ 0.32
SORT1-203ENST00000471996 PBKQ96KB5 322 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 UBXN10Q96LJ8 280 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 TNFRSF13CQ96RJ3 184 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 NAP1L3Q99457 506 aaPredicted RBP17.02■□□□□ 0.32
SORT1-203ENST00000471996 TACO1Q9BSH4 297 aaKnown RBP17.02■□□□□ 0.32
SORT1-203ENST00000471996 NTMT1Q9BV86 223 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 DSN1Q9H410 356 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 LRTM1Q9HBL6 345 aa17.02■□□□□ 0.32
SORT1-203ENST00000471996 GDF2Q9UK05 429 aaPredicted RBP17.02■□□□□ 0.32
SORT1-203ENST00000471996 IGHV4-30-2A0A087WSY4 118 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 TSPAN2O60636 221 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 PSMB1P20618 241 aaKnown RBP17.01■□□□□ 0.31
SORT1-203ENST00000471996 GPX6P59796 221 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 VLDLRP98155 873 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 ZNF844Q08AG5 666 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 ZNF672Q499Z4 452 aaPredicted RBP17.01■□□□□ 0.31
SORT1-203ENST00000471996 TRMT12Q53H54 448 aaKnown RBP17.01■□□□□ 0.31
SORT1-203ENST00000471996 NCMAPQ5T1S8 102 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 ALKBH2Q6NS38 261 aa17.01■□□□□ 0.31
SORT1-203ENST00000471996 ANKMY2Q8IV38 441 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms