RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 RNF11Q9Y3C5 154 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 LRRC42Q9Y546 428 aa6.58□□□□□ -1.36
BRCA1-210ENST00000471181 NPC1O15118 1278 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 MPIG6BO95866 241 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 M6PRP20645 277 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 UQCRC2P22695 453 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 GPR4P46093 362 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 GPR143P51810 404 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 GPX6P59796 221 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 APOFQ13790 326 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 LIPJQ5W064 366 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF776Q68DI1 518 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 DPY19L2P1Q6NXN4 242 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TMEM107Q6UX40 140 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PLPPR4Q7Z2D5 763 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 FAM217AQ8IXS0 508 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 OR4F6Q8NGB9 312 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF461Q8TAF7 563 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 RBMXL1Q96E39 390 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SGTBQ96EQ0 304 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 OR4K3Q96R72 315 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TCEAL7Q9BRU2 100 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 FUCA2Q9BTY2 467 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF436Q9C0F3 470 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 MTFR1LQ9H019 292 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 OBP2BQ9NPH6 170 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 FBXO7Q9Y3I1 522 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TCRBV21S2A2A0A5A6 115 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PLSCR5A0PG75 271 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 C17orf112F2Z3M2 114 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 MED6O75586 246 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TUSC2O75896 110 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 OR2J3O76001 311 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 DDCP20711 480 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PKLRP30613 574 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ARL2P36404 184 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PTTG1IPP53801 180 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 RPS15P62841 145 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF92Q03936 586 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SQSTM1Q13501 440 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 RCAN2Q14206 197 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ATP6AP1Q15904 470 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 CATSPERGQ6ZRH7 1159 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 OVCH1Q7RTY7 1134 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 METTL4Q8N3J2 472 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ASB9Q96DX5 294 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 REEP6Q96HR9 211 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SORCS2Q96PQ0 1159 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PKP2Q99959 881 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 DHRS9Q9BPW9 319 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 YTHDF1Q9BYJ9 559 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 CNTNAP3Q9BZ76 1288 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 QRSL1Q9H0R6 528 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ABCG5Q9H222 651 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 RPF2Q9H7B2 306 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF160Q9HCG1 818 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SLC2A4RGQ9NR83 387 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 CUTCQ9NTM9 273 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SPATA6Q9NWH7 488 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HRASLS2Q9NWW9 162 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 STXBP5LQ9Y2K9 1186 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PSAT1Q9Y617 370 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ARL2-SNX15V9GYD0 113 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 EDDM13A0A1B0GTR0 161 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 EFCAB7A8K855 629 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 BTNL10A8MVZ5 291 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TMEM233B4DJY2 109 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 F5H5K5 113 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 NXPH3O95157 252 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 FAM163BP0C2L3 166 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SCGB1C2P0DMR2 95 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ETFAP13804 333 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HOXB2P14652 356 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ZNF182P17025 639 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 HNRNPFP52597 415 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PLA2G7Q13093 441 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PTPRCAPQ14761 206 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 CTC1Q2NKJ3 1217 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 EARS2Q5JPH6 523 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 KIAA1211LQ6NV74 962 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 OGFOD3Q6PK18 319 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 VHLLQ6RSH7 139 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SLC24A5Q71RS6 500 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 NUP43Q8NFH3 380 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TFGQ92734 400 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 FBXW5Q969U6 566 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 RAB39BQ96DA2 213 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PRR11Q96HE9 360 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 COQ10AQ96MF6 247 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 SLC25A31Q9H0C2 315 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 USP36Q9P275 1121 aaKnown RBP6.57□□□□□ -1.36
BRCA1-210ENST00000471181 B3GNT3Q9Y2A9 372 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 FAM171A2A8MVW0 826 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 GABARAPH6UMI1 98 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 MAP2K7O14733 419 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 PHYHO14832 338 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TGM5O43548 720 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 ITM2AO43736 263 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 GABARAPO95166 117 aa6.57□□□□□ -1.36
BRCA1-210ENST00000471181 TPT1P13693 172 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms