RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 LASP1Q14847 261 aaKnown RBP11□□□□□ -0.65
VPS13D-204ENST00000469054 INAQ16352 499 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 CYP27C1Q4G0S4 372 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 TIGD2Q4W5G0 525 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 AGKQ53H12 422 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 EXOSC6Q5RKV6 272 aaKnown RBP11□□□□□ -0.65
VPS13D-204ENST00000469054 SLC22A10Q63ZE4 541 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 MFSD12Q6NUT3 480 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 BLOC1S3Q6QNY0 202 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 MSANTD1Q6ZTZ1 278 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 C6orf120Q7Z4R8 191 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 CISD2Q8N5K1 135 aaKnown RBP11□□□□□ -0.65
VPS13D-204ENST00000469054 CPSF7Q8N684 471 aaKnown RBP11□□□□□ -0.65
VPS13D-204ENST00000469054 FAM13CQ8NE31 585 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 OR10G3Q8NGC4 313 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 OR4N2Q8NGD1 307 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 OR5M3Q8NGP4 307 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 OR5AK3PQ8NH89 298 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 PAQR8Q8TEZ7 354 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 C10orf82Q8WW14 230 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 SLC9A6Q92581 669 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 TMBIM1Q969X1 311 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 VPS33AQ96AX1 596 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 SNRNP40Q96DI7 357 aaKnown RBP11□□□□□ -0.65
VPS13D-204ENST00000469054 C16orf58Q96GQ5 468 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 INPP5KQ9BT40 448 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 EPN3Q9H201 632 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 ZNF385DQ9H6B1 395 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 RMND5AQ9H871 391 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 SERHLQ9NQF3 203 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 GPATCH2Q9NW75 528 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 CBLCQ9ULV8 474 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 OR10H1Q9Y4A9 318 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 CHCHD2Q9Y6H1 151 aaPredicted RBP11□□□□□ -0.65
VPS13D-204ENST00000469054 SPTA1P02549 2419 aa11□□□□□ -0.65
VPS13D-204ENST00000469054 CROCCQ5TZA2 2017 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 RNF103-CHMP3A0A140T963 221 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 ASPDHA6ND91 283 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 CCDC154A6NI56 674 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 RFXANKO14593 260 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 TP53I11O14683 189 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SNPHO15079 494 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 TSPAN2O60636 221 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 REM1O75628 298 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 P04436 131 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 ALOX5P09917 674 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 CCL3P10147 92 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 ACP2P11117 423 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 CNR1P21554 472 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 CDKN2CP42773 168 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 INPP5JQ15735 1006 aaPredicted RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 PRR30Q53SZ7 412 aaPredicted RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 CDC73Q6P1J9 531 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 ZNF621Q6ZSS3 439 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 NUP54Q7Z3B4 507 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 PRICKLE2Q7Z3G6 844 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SULF2Q8IWU5 870 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 CLEC4FQ8N1N0 589 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 TRIML2Q8N7C3 387 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 FAM98AQ8NCA5 519 aaKnown RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SLC16A11Q8NCK7 471 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 FBXO30Q8TB52 745 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 CPT1CQ8TCG5 803 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SPPL2AQ8TCT8 520 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 GPR151Q8TDV0 419 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SPDL1Q96EA4 605 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SLC35A4Q96G79 324 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 ITCHQ96J02 903 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 TAAR6Q96RI8 345 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SECISBP2Q96T21 854 aaKnown RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 STACQ99469 402 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 ELAC2Q9BQ52 826 aaKnown RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 YIPF4Q9BSR8 244 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 ACTRT3Q9BYD9 372 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 NSRP1Q9H0G5 558 aaKnown RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SLC52A3Q9NQ40 469 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 SACM1LQ9NTJ5 587 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 MRGBPQ9NV56 204 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 GIN1Q9NXP7 522 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 CNIH4Q9P003 139 aa10.99□□□□□ -0.65
VPS13D-204ENST00000469054 MRTO4Q9UKD2 239 aaKnown RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 FAF1Q9UNN5 650 aaPredicted RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 TLN1Q9Y490 2541 aaKnown RBP10.99□□□□□ -0.65
VPS13D-204ENST00000469054 GXYLT2A0PJZ3 443 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 ANKRD33BA6NCL7 494 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 OR6C70A6NIJ9 312 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 NR5A2O00482 541 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 SLC28A2O43868 658 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 PEX1O43933 1283 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 UGT2B11O75310 529 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 SOX30O94993 753 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 KCNH1O95259 989 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 IL33O95760 270 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 KRT16P08779 473 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 CD1EP15812 388 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 DRD4P21917 467 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 MATN1P21941 496 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 IL12BP29460 328 aa10.98□□□□□ -0.65
VPS13D-204ENST00000469054 KRT20P35900 424 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms