RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 OR14A16Q8NHC5 309 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 C16orf52Q8NHV5 167 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 KAT2AQ92830 837 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 RIT1Q92963 219 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 RBM18Q96H35 190 aaKnown RBP13.52□□□□□ -0.25
NCK1-202ENST00000460960 CNPPD1Q9BV87 410 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 REEP4Q9H6H4 257 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 TIMMDC1Q9NPL8 285 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 FGFR1OP2Q9NVK5 253 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 ASIC5Q9NY37 505 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 MAT2BQ9NZL9 334 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 NOP53Q9NZM5 478 aaKnown RBP13.52□□□□□ -0.25
NCK1-202ENST00000460960 EHD3Q9NZN3 535 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 CLCA3PQ9Y6N3 262 aa13.52□□□□□ -0.25
NCK1-202ENST00000460960 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 FAM221AA4D161 298 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 MYO1GB0I1T2 1018 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 SLCO1B7G3V0H7 640 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 ACOT7O00154 380 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 SCAMP2O15127 329 aaKnown RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 ATP1B1P05026 303 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 LAMP1P11279 417 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 PRPS2P11908 318 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 PCSK2P16519 638 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 CSNK2A2P19784 350 aaPredicted RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 NT5EP21589 574 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 IL12AP29459 219 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 GSTM5P46439 218 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 CLCN2P51788 898 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 AQP5P55064 265 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 PPIAP62937 165 aaKnown RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 FOXD4Q12950 439 aaPredicted RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 SNTB1Q13884 538 aaKnown RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 SPRED3Q2MJR0 410 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 PRICKLE4Q2TBC4 344 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 TRMT12Q53H54 448 aaKnown RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 EMC4Q5J8M3 183 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 ZNF551Q7Z340 670 aaPredicted RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 C9orf40Q8IXQ3 194 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 LRRC34Q8IZ02 419 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 LRRC25Q8N386 305 aaPredicted RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 ZFP62Q8NB50 900 aaPredicted RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 MORN4Q8NDC4 146 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 ACTRT2Q8TDY3 377 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 NINJ1Q92982 152 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 FBXL20Q96IG2 436 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 GPATCH1Q9BRR8 931 aaKnown RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 LIME1Q9H400 295 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 GLIPR2Q9H4G4 154 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 CCDC134Q9H6E4 229 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 NPHS2Q9NP85 383 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 MIEF1Q9NQG6 463 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 PFDN4Q9NQP4 134 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 PNPLA3Q9NST1 481 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 AIG1Q9NVV5 245 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 TAS2R7Q9NYW3 318 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 SH3BP4Q9P0V3 963 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 ATP6V1HQ9UI12 483 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 ST6GALNAC2Q9UJ37 374 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 DCTN4Q9UJW0 460 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 EIF3LQ9Y262 564 aaKnown RBP13.51□□□□□ -0.25
NCK1-202ENST00000460960 PLEKHA6Q9Y2H5 1048 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 GPR45Q9Y5Y3 372 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 ZNF780BQ9Y6R6 833 aa13.51□□□□□ -0.25
NCK1-202ENST00000460960 A8MVJ9 347 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 G3V3Y1 287 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 ZNF354AO60765 605 aaPredicted RBP13.5□□□□□ -0.25
NCK1-202ENST00000460960 CBX7O95931 251 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 DNASE1P24855 282 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 MAPK1P28482 360 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 ASMTP46597 345 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 ZFP36L2P47974 494 aaKnown RBP13.5□□□□□ -0.25
NCK1-202ENST00000460960 SSR4P51571 173 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 DGKQP52824 942 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 UFM1P61960 85 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 PHC1P78364 1004 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 SMU1Q2TAY7 513 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 GXYLT1Q4G148 440 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 ZNF628Q5EBL2 1059 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 HOMEZQ8IX15 550 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 GALNT12Q8IXK2 581 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 DAZLQ92904 295 aaKnown RBP13.5□□□□□ -0.25
NCK1-202ENST00000460960 PPCDCQ96CD2 204 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 RMND5BQ96G75 393 aaPredicted RBP13.5□□□□□ -0.25
NCK1-202ENST00000460960 VMP1Q96GC9 406 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 AMDHD1Q96NU7 426 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 ZNF317Q96PQ6 595 aaPredicted RBP13.5□□□□□ -0.25
NCK1-202ENST00000460960 BRINP2Q9C0B6 783 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 CXXC4Q9H2H0 198 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 HPF1Q9NWY4 346 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 ZNF639Q9UID6 485 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 PSME2Q9UL46 239 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 DTX4Q9Y2E6 619 aa13.5□□□□□ -0.25
NCK1-202ENST00000460960 PINLYPA6NC86 204 aa13.49□□□□□ -0.25
NCK1-202ENST00000460960 FIGNL2A6NMB9 653 aa13.49□□□□□ -0.25
NCK1-202ENST00000460960 E9PBE3 544 aa13.49□□□□□ -0.25
NCK1-202ENST00000460960 TBX19O60806 448 aa13.49□□□□□ -0.25
NCK1-202ENST00000460960 VIMP08670 466 aaKnown RBP13.49□□□□□ -0.25
NCK1-202ENST00000460960 COX7A2P14406 83 aa13.49□□□□□ -0.25
NCK1-202ENST00000460960 ACVR2AP27037 513 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms