RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 KAT2AQ92830 837 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 ANKRD9Q96BM1 317 aaPredicted RBP9.66□□□□□ -0.86
USP39-210ENST00000459775 ITPKCQ96DU7 683 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 C7orf34Q96L11 122 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 ZNF681Q96N22 645 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 GBP5Q96PP8 586 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 FAIM2Q9BWQ8 316 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 LRMDAQ9H2I8 198 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 GLIPR2Q9H4G4 154 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 CXorf36Q9H7Y0 433 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 LYRM4Q9HD34 91 aa9.66□□□□□ -0.86
USP39-210ENST00000459775 LYARQ9NX58 379 aaKnown RBP9.66□□□□□ -0.86
USP39-210ENST00000459775 A0A088AWK7 358 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 A0A1W2PRB8 838 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 NOTOA8MTQ0 251 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 DSCR3O14972 297 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 TNFRSF21O75509 655 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 LINGO3P0C6S8 592 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 FGF5P12034 268 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 DRD2P14416 443 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 ZNF10P21506 573 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 SLC6A2P23975 617 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 XKP51811 444 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 NCBP2P52298 156 aaKnown RBP eCLIP9.65□□□□□ -0.863e-6■■□□□ 12.2
USP39-210ENST00000459775 MANFP55145 182 aaKnown RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 DCAF7P61962 342 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 RPS26P62854 115 aaKnown RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 CDC20Q12834 499 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 ARHGAP40Q5TG30 622 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 NANOGP8Q6NSW7 305 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 RHBDD2Q6NTF9 364 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 RPUSD3Q6P087 351 aaKnown RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 C8orf82Q6P1X6 216 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 R3HCC1LQ7Z5L2 792 aaKnown RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 CAMKMTQ7Z624 323 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 HPS6Q86YV9 775 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 OR9A2Q8NGT5 310 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 TSLPQ969D9 159 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 TRIM63Q969Q1 353 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 OTUB1Q96FW1 271 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 TMEM68Q96MH6 324 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 AMDHD1Q96NU7 426 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 BBS4Q96RK4 519 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 UBL7Q96S82 380 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 ULBP3Q9BZM4 244 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 BHLHE41Q9C0J9 482 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 ROGDIQ9GZN7 287 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 NANOGQ9H9S0 305 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 CMTM6Q9NX76 183 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 ADA2Q9NZK5 511 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 FOXJ2Q9P0K8 574 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 PHF11Q9UIL8 331 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 PCDHGA1Q9Y5H4 931 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 CLDN16Q9Y5I7 305 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 DMRT1Q9Y5R6 373 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 CFAP47Q6ZTR5 3102 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 AKAP13Q12802 2813 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 A8MUI8 341 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 C9orf172C9J069 976 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 HRKO00198 91 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 NME4O00746 187 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 ATP5HO75947 161 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 ANP32DO95626 131 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 HMGN1P05114 100 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 JMJD7P0C870 316 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 RNH1P13489 461 aaKnown RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 HOXB9P17482 250 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 FBLP22087 321 aaKnown RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 SOX18P35713 384 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 RAB38P57729 211 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 SLC13A2Q13183 592 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 CEACAM7Q14002 265 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 TRMT5Q32P41 509 aaKnown RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 NKAIN1Q4KMZ8 207 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 MLIPQ5VWP3 458 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 ZNF385CQ66K41 422 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 WDR53Q7Z5U6 358 aaPredicted RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 IFNEQ86WN2 208 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 DPP10Q8N608 796 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 PCYOX1LQ8NBM8 494 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 TEX47Q8TBZ9 253 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 CCDC124Q96CT7 223 aaKnown RBP9.65□□□□□ -0.86
USP39-210ENST00000459775 CRELD1Q96HD1 420 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 ITCHQ96J02 903 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 TUBB6Q9BUF5 446 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 PINK1Q9BXM7 581 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 STRADBQ9C0K7 418 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 NECTIN3Q9NQS3 549 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 LANCL2Q9NS86 450 aa9.65□□□□□ -0.86
USP39-210ENST00000459775 SEC16AO15027 2179 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 BBIP1A8MTZ0 92 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 H0YIG0 161 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 MGRN1O60291 552 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 CRTAPO75718 401 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 DKK1O94907 266 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 BMP10O95393 424 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 FHP07954 510 aa9.64□□□□□ -0.87
USP39-210ENST00000459775 TLX1P31314 330 aaPredicted RBP9.64□□□□□ -0.87
USP39-210ENST00000459775 SOAT1P35610 550 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms