RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 ZNF354BQ96LW1 612 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 VSTM2LQ96N03 204 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF347Q96SE7 839 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 CTRCQ99895 268 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 PNO1Q9NRX1 252 aaKnown RBP22.73■■□□□ 1.23
U2AF1-204ENST00000459639 NDUFAF4Q9P032 175 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 MKL2Q9ULH7 1088 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 LRCH1Q9Y2L9 728 aa22.73■■□□□ 1.23
U2AF1-204ENST00000459639 TTC36A6NLP5 189 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 B4E171 279 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 ALPPP05187 535 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 TSPAN7P41732 249 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 EFNA3P52797 238 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 DCST2Q5T1A1 773 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 FRRS1Q6ZNA5 592 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 TSEN54Q7Z6J9 526 aaKnown RBP22.72■■□□□ 1.23
U2AF1-204ENST00000459639 TMEM151BQ8IW70 566 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 RNF31Q96EP0 1072 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 FBXL20Q96IG2 436 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF300Q96RE9 604 aaPredicted RBP22.72■■□□□ 1.23
U2AF1-204ENST00000459639 SDF2Q99470 211 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 CMKLR1Q99788 373 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF350Q9GZX5 532 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 TRIM45Q9H8W5 580 aaPredicted RBP22.72■■□□□ 1.23
U2AF1-204ENST00000459639 PARD6AQ9NPB6 346 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 RAB26Q9ULW5 256 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 SH3GLB1Q9Y371 365 aa22.72■■□□□ 1.23
U2AF1-204ENST00000459639 PRAMEF25A6NGN4 478 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 G3V2T6 193 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 EI24O14681 340 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 E2F6O75461 281 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 IFNW1P05000 195 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 ZGLP1P0C6A0 271 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 CCL4P13236 92 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 UQCRBP14927 111 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 GABRA3P34903 492 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 DCTP40126 519 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 OR1E2P47887 323 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 POU6F2P78424 691 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-204ENST00000459639 OVCH1Q7RTY7 1134 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF615Q8N8J6 731 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 ZNF570Q96NI8 536 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 LRFN3Q9BTN0 628 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 PINK1Q9BXM7 581 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 RSPO3Q9BXY4 272 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-204ENST00000459639 OR10A5Q9H207 317 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 VNN3Q9NY84 501 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 PRODH2Q9UF12 536 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 WDR45Q9Y484 360 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 FRYLO94915 3013 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 TMX2-CTNND1H3BSU7 103 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 DIRAS1O95057 198 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 ZIC2O95409 532 aaPredicted RBP22.71■■□□□ 1.23
U2AF1-204ENST00000459639 PABPC4LP0CB38 370 aaKnown RBP22.71■■□□□ 1.23
U2AF1-204ENST00000459639 IST1P53990 364 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 PSG6Q00889 435 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 NSDHLQ15738 373 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 CYP27C1Q4G0S4 372 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 TYW3Q6IPR3 259 aaKnown RBP22.71■■□□□ 1.23
U2AF1-204ENST00000459639 LAPTM4BQ86VI4 370 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 HIPK1Q86Z02 1210 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 PRSS58Q8IYP2 241 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 PIK3R3Q92569 461 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 FKBP10Q96AY3 582 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 STRADBQ9C0K7 418 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 REEP1Q9H902 201 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 POLE3Q9NRF9 147 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 ENPP4Q9Y6X5 453 aa22.71■■□□□ 1.23
U2AF1-204ENST00000459639 ADAMDEC1O15204 470 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 STX11O75558 287 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 CLPSP04118 112 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 INSM1Q01101 510 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-204ENST00000459639 PUM1Q14671 1186 aaKnown RBP eCLIP22.7■■□□□ 1.22
U2AF1-204ENST00000459639 SHQ1Q6PI26 577 aaKnown RBP22.7■■□□□ 1.22
U2AF1-204ENST00000459639 STK32CQ86UX6 486 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 OR14A16Q8NHC5 309 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 PMM1Q92871 262 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 SENP5Q96HI0 755 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-204ENST00000459639 ART5Q96L15 291 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 LRFN5Q96NI6 719 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 AMBRA1Q9C0C7 1298 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 SAP130Q9H0E3 1048 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 SLC26A1Q9H2B4 701 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 MTHFD2LQ9H903 347 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-204ENST00000459639 IFT80Q9P2H3 777 aaPredicted RBP22.7■■□□□ 1.22
U2AF1-204ENST00000459639 PCDHGA1Q9Y5H4 931 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 CLCA3PQ9Y6N3 262 aa22.7■■□□□ 1.22
U2AF1-204ENST00000459639 C7orf72A4D263 438 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 VSTM2BA6NLU5 285 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 MEN1O00255 615 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 SYT5O00445 386 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 GDF9O60383 454 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 FCMRO60667 390 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 DNAJB5O75953 348 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 HPRP00739 348 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 ALBP02768 609 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 FPR1P21462 350 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 AGXTP21549 392 aa22.69■■□□□ 1.22
U2AF1-204ENST00000459639 DNAJA1P31689 397 aaKnown RBP22.69■■□□□ 1.22
U2AF1-204ENST00000459639 DAG1Q14118 895 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms