RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 SLC7A6OSQ96CW6 309 aaPredicted RBP15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 CMTM5Q96DZ9 223 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 RBM18Q96H35 190 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 SENP5Q96HI0 755 aaPredicted RBP15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 PELOQ9BRX2 385 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 RMND5AQ9H871 391 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 TIMMDC1Q9NPL8 285 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 SLC35C2Q9NQQ7 365 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 DEPPQ9NTK1 212 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 FAM120CQ9NX05 1096 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 ARMCX1Q9P291 453 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 CES1P1Q9UKY3 287 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 PCDHGB4Q9UN71 923 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 EXO1Q9UQ84 846 aaKnown RBP15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 ZNF835Q9Y2P0 537 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 PCNX1Q96RV3 2341 aa15.74■□□□□ 0.11
PRPF40A-204ENST00000450303 PINLYPA6NC86 204 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 NR5A2O00482 541 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 TFECO14948 347 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 PDPK1O15530 556 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 HS6ST1O60243 411 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 CDC40O60508 579 aaKnown RBP eCLIP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 PGRP06401 933 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 ABOP16442 354 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 CSNK2A2P19784 350 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 IL12AP29459 219 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 PRDX6P30041 224 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 MPIP34949 423 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 MXRA7P84157 204 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 STX5Q13190 355 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 CYLC2Q14093 348 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 SPANXN4Q5MJ08 99 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 C6orf163Q5TEZ5 329 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 MSANTD1Q6ZTZ1 278 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 NCCRP1Q6ZVX7 275 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 MRGPRGQ86SM5 289 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 MMP21Q8N119 569 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 GHDCQ8N2G8 530 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 PSD4Q8NDX1 1056 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 RP9Q8TA86 221 aaKnown RBP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 ITLN2Q8WWU7 325 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 SPDL1Q96EA4 605 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 ZBED6CLQ96FA7 236 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 TEX37Q96LM6 180 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 OR52E6Q96RD3 313 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 CNPPD1Q9BV87 410 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 MMADHCQ9H3L0 296 aaPredicted RBP15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 COPS7AQ9UBW8 275 aa15.73■□□□□ 0.11
PRPF40A-204ENST00000450303 UNC79Q9P2D8 2635 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 A0A0G2JMM0 328 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 A0A1W2PPB8 328 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 A0A1W2PRS3 328 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 A0A1W2PS29 197 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 BBIP1A8MTZ0 92 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 KIR3DP1A8MWS1 328 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 PRSS44E7EML9 344 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 ANGPT2O15123 496 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 CIB2O75838 187 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 PDE9AO76083 593 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 LAMP1P11279 417 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 PORP16435 677 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 XKP51811 444 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 NR0B1P51843 470 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 RCAN2Q14206 197 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 ZNF267Q14586 743 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 MMEL1Q495T6 779 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 SP5Q6BEB4 398 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 OR4F3Q6IEY1 312 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 ANKRD26P1Q6NSI1 321 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 C3P1Q6ZMU1 363 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 GK5Q6ZS86 529 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 FGD2Q7Z6J4 655 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 FUNDC1Q8IVP5 155 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 CHERPQ8IWX8 916 aaKnown RBP15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 POGLUT1Q8NBL1 392 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 OR5L2Q8NGL0 311 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 OR8K3Q8NH51 312 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 DEFB127Q9H1M4 99 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 ACSS1Q9NUB1 689 aaPredicted RBP15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 NDUFAF1Q9Y375 327 aa15.72■□□□□ 0.11
PRPF40A-204ENST00000450303 CENPEQ02224 2701 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 A0A1B0GTH9 108 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 PRSS51A0A1B0GVH4 220 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 A0A1W2PP18 115 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 A0A1W2PRB8 838 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 CAPN14A8MX76 684 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 RNASET2O00584 256 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 OR10H2O60403 315 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 COX4I1P13073 169 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 DGKQP52824 942 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 MANFP55145 182 aaKnown RBP15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 ADORA2A-AS1P86434 159 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 PLIN5Q00G26 463 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 ZNF385BQ569K4 471 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 Q6ZPB1 254 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 C9orf40Q8IXQ3 194 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 GPALPP1Q8IXQ4 340 aa15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 ST13P4Q8IZP2 240 aaPredicted RBP15.71■□□□□ 0.11
PRPF40A-204ENST00000450303 LRRC25Q8N386 305 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms