RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 TRIM23P36406 574 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 FAM209AQ5JX71 171 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 KIAA1211LQ6NV74 962 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 CNKSR3Q6P9H4 555 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 TMEM91Q6ZNR0 172 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 NUDT13Q86X67 352 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 MARCH9Q86YJ5 346 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 TCTE3Q8IZS6 198 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 OR7G1Q8NGA0 311 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 ZFAND1Q8TCF1 268 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 GALNT9Q9HCQ5 603 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 RBFOX1Q9NWB1 397 aaKnown RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 TMA7Q9Y2S6 64 aaKnown RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 C17orf113A0A1B0GUU1 675 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 CPSF4LA6NMK7 179 aaKnown RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 GTPBP1O00178 669 aaKnown RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 TNFRSF10AO00220 468 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 CACNB4O00305 520 aaPredicted RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 GABRPO00591 440 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 LANCL1O43813 399 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 PIP5K1CO60331 668 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 ZNF780AO75290 641 aaPredicted RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 HMGN2P05204 90 aaKnown RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 SERPIND1P05546 499 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 ACP5P13686 325 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 KELP23276 732 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 EVI2BP34910 448 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 NNMTP40261 264 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 EVX1P49640 407 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 GZMKP49863 264 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 NCBP2P52298 156 aaKnown RBP eCLIP12.83□□□□□ -0.362e-7■□□□□ 8.3
POLR1B-209ENST00000448770 RAB25P57735 213 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 SMIM11AP58511 58 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 LRRC32Q14392 662 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 KLHL22Q53GT1 634 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 PIP5KL1Q5T9C9 394 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 SLC27A4Q6P1M0 643 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 PRR23CQ6ZRP0 262 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 NKAIN4Q8IVV8 208 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 ING5Q8WYH8 240 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 AIF1LQ9BQI0 150 aa12.83□□□□□ -0.36
POLR1B-209ENST00000448770 RPRD1BQ9NQG5 326 aaKnown RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 ACSS1Q9NUB1 689 aaPredicted RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 SIRT4Q9Y6E7 314 aaPredicted RBP12.83□□□□□ -0.36
POLR1B-209ENST00000448770 TRDV1A0A1B0GX56 115 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 ZC3H12DA2A288 527 aaKnown RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 LYRM1O43325 122 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 CELP19835 753 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 ITGB8P26012 769 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 HTR2BP41595 481 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 OMPP47874 163 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 PPP3R1P63098 170 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 SNRPNP63162 240 aaKnown RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 ABATP80404 500 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 IL18Q14116 193 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 DUSP6Q16828 381 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 AADACL4Q5VUY2 407 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 KIAA1161Q6NSJ0 714 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 PLET1Q6UQ28 207 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 RASSF5Q8WWW0 418 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 DIO2Q92813 273 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 CNRIP1Q96F85 164 aaPredicted RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 ZC3HAV1LQ96H79 300 aaKnown RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 PPP1R16AQ96I34 528 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 GFM1Q96RP9 751 aaKnown RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 KCNJ15Q99712 375 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 TMEM43Q9BTV4 400 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 ZCCHC2Q9C0B9 1178 aaKnown RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 PPIL3Q9H2H8 161 aaKnown RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 PELI2Q9HAT8 420 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 MCUBQ9NWR8 336 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 MAFFQ9ULX9 164 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 LTBP2Q14767 1821 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 SOCS6O14544 535 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 CXCL14O95715 111 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 RB1P06400 928 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 RHOP08100 348 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 SDHBP21912 280 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 GPR4P46093 362 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 CDH11P55287 796 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 CLDN20P56880 219 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 CSNK1G2P78368 415 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 NDUFA9Q16795 377 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 IL20RBQ6UXL0 311 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 POGLUT1Q8NBL1 392 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 DUSP18Q8NEJ0 188 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 TEX47Q8TBZ9 253 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 SPRYD4Q8WW59 207 aaPredicted RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 XKR8Q9H6D3 395 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 DDX31Q9H8H2 851 aaKnown RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 ISG20L2Q9H9L3 353 aaKnown RBP12.82□□□□□ -0.36
POLR1B-209ENST00000448770 BCL2L10Q9HD36 194 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 SLC35C2Q9NQQ7 365 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 CLCA2Q9UQC9 943 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 SLC9A8Q9Y2E8 581 aa12.82□□□□□ -0.36
POLR1B-209ENST00000448770 A0A1B0GVC2 190 aa12.81□□□□□ -0.36
POLR1B-209ENST00000448770 A6NIN4 97 aa12.81□□□□□ -0.36
POLR1B-209ENST00000448770 MAN2B1O00754 1011 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms