RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 SRMSQ9H3Y6 488 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 EGLN3Q9H6Z9 239 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 SEC14L4Q9UDX3 406 aa16.71■□□□□ 0.27
CLDN9-201ENST00000445369 LRP4O75096 1905 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 FAM170BA6NMN3 283 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 MYL12BO14950 172 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 RAB36O95755 333 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 EGFP01133 1207 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 CRYBB2P43320 205 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 PDX1P52945 283 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 GAS1P54826 345 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 CCDC190Q86UF4 302 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 MEX3DQ86XN8 651 aaKnown RBP16.7■□□□□ 0.26
CLDN9-201ENST00000445369 LRRC25Q8N386 305 aaPredicted RBP16.7■□□□□ 0.26
CLDN9-201ENST00000445369 FAM83FQ8NEG4 500 aaPredicted RBP16.7■□□□□ 0.26
CLDN9-201ENST00000445369 OR7G2Q8NG99 324 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 SLC22A18Q96BI1 424 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 TM4SF19Q96DZ7 209 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 SLC35A4Q96G79 324 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 WDR92Q96MX6 357 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 MS4A4EQ96PG1 132 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 POLR2J2Q9GZM3 115 aaKnown RBP16.7■□□□□ 0.26
CLDN9-201ENST00000445369 ANKRD19PQ9H560 264 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 SLC13A4Q9UKG4 626 aa16.7■□□□□ 0.26
CLDN9-201ENST00000445369 A0A075B6Q4 140 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 CPSF4LA6NMK7 179 aaKnown RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 RFXAPO00287 272 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 MED26O95402 600 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 SLC35G6P0C7Q6 338 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 SMIM10L1P0DMW3 83 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 TRHRP34981 398 aaPredicted RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 IFNGR2P38484 337 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 TSPAN31Q12999 210 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 SLC13A2Q13183 592 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 C1DQ13901 141 aaKnown RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 SNAPC1Q16533 368 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 MFSD12Q6NUT3 480 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 FBXO42Q6P3S6 717 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 USP30Q70CQ3 517 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 PRICKLE2Q7Z3G6 844 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 TRIM73Q86UV7 250 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 OR8D4Q8NGM9 314 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 TEX47Q8TBZ9 253 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 SIPA1Q96FS4 1042 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 TRMT61AQ96FX7 289 aaKnown RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 SMIM10Q96HG1 83 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 ASPNQ9BXN1 380 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 NUAK2Q9H093 628 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 CPNE5Q9HCH3 593 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 EXOSC4Q9NPD3 245 aaKnown RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 CD93Q9NPY3 652 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 KCMF1Q9P0J7 381 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 STUB1Q9UNE7 303 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 A6NCN8 305 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 P2RX6O15547 441 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 UBXN7O94888 489 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 MAGP20916 626 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 PSMA1P25786 263 aaKnown RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 ACTR1BP42025 376 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 ACTR1AP61163 376 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 ST3GAL3Q11203 375 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 KIR2DS3Q14952 304 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 FAM214AQ32MH5 1076 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 C6orf132Q5T0Z8 1188 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 CDC73Q6P1J9 531 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 SLC27A4Q6P1M0 643 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 FRRS1Q6ZNA5 592 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 RD3Q7Z3Z2 195 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 TMEM163Q8TC26 289 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 ADAMTS15Q8TE58 950 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 TSACCQ96A04 125 aaPredicted RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 MRPL38Q96DV4 380 aaKnown RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 BMFQ96LC9 184 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 OR2A14Q96R47 310 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 OR2A5Q96R48 311 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 CNPPD1Q9BV87 410 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 MRPS18AQ9NVS2 196 aaKnown RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 CHCHD3Q9NX63 227 aaKnown RBP16.69■□□□□ 0.26
CLDN9-201ENST00000445369 PHF11Q9UIL8 331 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 ZNF229Q9UJW7 825 aa16.69■□□□□ 0.26
CLDN9-201ENST00000445369 HYKKA2RU49 373 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 DUXAA6NLW8 204 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 FCMRO60667 390 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 CPN2P22792 545 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 GTF2E2P29084 291 aaKnown RBP16.68■□□□□ 0.26
CLDN9-201ENST00000445369 CTHP32929 405 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 OMPP47874 163 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 CD300CQ08708 224 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 COL9A2Q14055 689 aaPredicted RBP16.68■□□□□ 0.26
CLDN9-201ENST00000445369 SUZ12Q15022 739 aaKnown RBP16.68■□□□□ 0.26
CLDN9-201ENST00000445369 PRRT3Q5FWE3 981 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 C3orf38Q5JPI3 329 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 SLC36A4Q6YBV0 504 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 ZNF730Q6ZMV8 503 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 RASSF6Q6ZTQ3 369 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 PHC2Q8IXK0 858 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 SLC16A11Q8NCK7 471 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 OR52P1PQ8NH57 321 aa16.68■□□□□ 0.26
CLDN9-201ENST00000445369 SERINC2Q96SA4 455 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms