RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 C6orf89Q6UWU4 347 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 MAL2Q969L2 176 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 HS6ST2Q96MM7 605 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 UTP23Q9BRU9 249 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 SACM1LQ9NTJ5 587 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 GRHPRQ9UBQ7 328 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 MAN2B2Q9Y2E5 1009 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 PCDHGB7Q9Y5F8 929 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 LRRC37A2A6NM11 1700 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 PRAMEF33A0A0G2JMD5 474 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 NELFEP18615 380 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 EIF3IQ13347 325 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 MAPK11Q15759 364 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 KLHL26Q53HC5 615 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 HDDC2Q7Z4H3 204 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 TRIM46Q7Z4K8 759 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 TSSK6Q9BXA6 273 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 FSCN3Q9NQT6 498 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 CRNNQ9UBG3 495 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 OAZ3Q9UMX2 235 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 LRIT2A6NDA9 550 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 MAGEB3O15480 346 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 GPX3P22352 226 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 PEX2P28328 305 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 PAGE3Q5JUK9 113 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 PMS2CLQ68D20 193 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 METTL25Q8N6Q8 603 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 GALNT6Q8NCL4 622 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 OR10H4Q8NGA5 316 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 OR2A1Q8NGT9 310 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 GPR78Q96P69 363 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 ZPBPQ9BS86 351 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 COQ10BQ9H8M1 238 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 USP36Q9P275 1121 aaKnown RBP13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 ZNF624Q9P2J8 865 aaPredicted RBP13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 CBLCQ9ULV8 474 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 ANKRD12Q6UB98 2062 aa13.26□□□□□ -0.29
SMARCA4-204ENST00000444061 B3GALT4O96024 378 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 DLSTP36957 453 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 SMSP52788 366 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 HSD17B7P56937 341 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 SF3B4Q15427 424 aaKnown RBP eCLIP13.25□□□□□ -0.293e-7■■■■■ 27.6
SMARCA4-204ENST00000444061 PDZK1Q5T2W1 519 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 ZNF619Q8N2I2 560 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 MZB1Q8WU39 189 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 EID2BQ96D98 161 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 ZNF559Q9BR84 538 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 GJE1A6NN92 205 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 TNFRSF10AO00220 468 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 TNFSF14O43557 240 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 CCL11P51671 97 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 SRYQ05066 204 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 CBX3Q13185 183 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 SF3A2Q15428 464 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 TRIQKQ629K1 86 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 FRRS1Q6ZNA5 592 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 OR5D16Q8NGK9 328 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 ATG4BQ9Y4P1 393 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 NOX1Q9Y5S8 564 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 C11orf98E9PRG8 122 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 TRA2AQ13595 282 aaKnown RBP eCLIP13.25□□□□□ -0.298e-8■■■□□ 15.5
SMARCA4-204ENST00000444061 MAPK14Q16539 360 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 DCST2Q5T1A1 773 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 ENPP6Q6UWR7 440 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 IPCEF1Q8WWN9 437 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 CDS1Q92903 461 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 ITFG2Q969R8 447 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 MS4A6EQ96DS6 147 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 DNAJA3Q96EY1 480 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 ZNF419Q96HQ0 510 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 NUDT22Q9BRQ3 303 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 POLDIP3Q9BY77 421 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 CLEC4MQ9H2X3 399 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 CLMPQ9H6B4 373 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 MGAT4BQ9UQ53 548 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 A0A1B0GTQ1 180 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 NSA2O95478 260 aaKnown RBP13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 SLC35E2P0CK97 266 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 FAM111BQ6SJ93 734 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 RPTNQ6XPR3 784 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 Q6ZSR9 355 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 ATCAYQ86WG3 371 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 KBTBD8Q8NFY9 601 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 ENKURQ8TC29 256 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 MVB12AQ96EY5 273 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 COX14Q96I36 57 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 CCNL2Q96S94 520 aaPredicted RBP13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 LYRM4Q9HD34 91 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 POLE3Q9NRF9 147 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 CENPMQ9NSP4 180 aa13.25□□□□□ -0.29
SMARCA4-204ENST00000444061 CENPXA8MT69 81 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 PATE3B3GLJ2 98 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 IDH3BO43837 385 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 WBP4O75554 376 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 FARS2O95363 451 aaKnown RBP13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 H6PDO95479 791 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 ADORA3P0DMS8 318 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 ALG10BQ5I7T1 473 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 LINC00696Q6ZRV3 163 aa13.24□□□□□ -0.29
SMARCA4-204ENST00000444061 CAPSLQ8WWF8 208 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms