RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 ANP32BQ92688 251 aaKnown RBP12.48□□□□□ -0.41
LINC00642-202ENST00000442515 MAGOHBQ96A72 148 aaKnown RBP12.48□□□□□ -0.41
LINC00642-202ENST00000442515 C11orf24Q96F05 449 aaPredicted RBP12.48□□□□□ -0.41
LINC00642-202ENST00000442515 CFAP36Q96G28 342 aa12.48□□□□□ -0.41
LINC00642-202ENST00000442515 MTERF1Q99551 399 aaKnown RBP12.48□□□□□ -0.41
LINC00642-202ENST00000442515 TRAF4Q9BUZ4 470 aaPredicted RBP12.48□□□□□ -0.41
LINC00642-202ENST00000442515 ALG2Q9H553 416 aa12.48□□□□□ -0.41
LINC00642-202ENST00000442515 ESRP2Q9H6T0 727 aaKnown RBP12.48□□□□□ -0.41
LINC00642-202ENST00000442515 DDX31Q9H8H2 851 aaKnown RBP12.48□□□□□ -0.41
LINC00642-202ENST00000442515 PLSCR4Q9NRQ2 329 aa12.48□□□□□ -0.41
LINC00642-202ENST00000442515 CLEC4AQ9UMR7 237 aa12.48□□□□□ -0.41
LINC00642-202ENST00000442515 EMC9Q9Y3B6 208 aa12.48□□□□□ -0.41
LINC00642-202ENST00000442515 OR6C70A6NIJ9 312 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 CD8AP01732 235 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 CPMP14384 443 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 PSMB1P20618 241 aaKnown RBP12.47□□□□□ -0.41
LINC00642-202ENST00000442515 CXCR5P32302 372 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 PIK3CBP42338 1070 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 XKP51811 444 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 ARFIP1P53367 373 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 NUDT6P53370 316 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 DSCR4P56555 118 aaPredicted RBP12.47□□□□□ -0.41
LINC00642-202ENST00000442515 EXOSC7Q15024 291 aaKnown RBP12.47□□□□□ -0.41
LINC00642-202ENST00000442515 CTU2Q2VPK5 515 aaKnown RBP12.47□□□□□ -0.41
LINC00642-202ENST00000442515 NCMAPQ5T1S8 102 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 GRHL2Q6ISB3 625 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 ATG4DQ86TL0 474 aaPredicted RBP12.47□□□□□ -0.41
LINC00642-202ENST00000442515 METTL25Q8N6Q8 603 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 OR4K14Q8NGD5 310 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 TMBIM1Q969X1 311 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 COL21A1Q96P44 957 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 BRINP2Q9C0B6 783 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 STMN4Q9H169 189 aaPredicted RBP12.47□□□□□ -0.41
LINC00642-202ENST00000442515 OR10A4Q9H209 315 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 FANCFQ9NPI8 374 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 CD274Q9NZQ7 290 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 BCAP29Q9UHQ4 241 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 GPR52Q9Y2T5 361 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 PLLPQ9Y342 182 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 EXPH5Q8NEV8 1989 aa12.47□□□□□ -0.41
LINC00642-202ENST00000442515 ELOA3DA6NLF2 546 aaPredicted RBP12.46□□□□□ -0.41
LINC00642-202ENST00000442515 H3BML4 177 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 TO15178 435 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 DLX3O60479 287 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 LMX1BO60663 402 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 WISP3O95389 354 aaPredicted RBP12.46□□□□□ -0.41
LINC00642-202ENST00000442515 GBAP04062 536 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 PGRP06401 933 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 SLC6A8P48029 635 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 GAS1P54826 345 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 MGAT2Q10469 447 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 NRF1Q16656 503 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 ELOA3BQ3SY89 546 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 HP1BP3Q5SSJ5 553 aaPredicted RBP12.46□□□□□ -0.41
LINC00642-202ENST00000442515 UBAP2Q5T6F2 1119 aaKnown RBP12.46□□□□□ -0.41
LINC00642-202ENST00000442515 LIPNQ5VXI9 398 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 CYB5R2Q6BCY4 276 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 PPP4R4Q6NUP7 873 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 FAM111BQ6SJ93 734 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 CLEC2AQ6UVW9 174 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 NUDT13Q86X67 352 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 ELOA3Q8NG57 546 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 OR5M1Q8NGP8 315 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 EXT2Q93063 718 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 GFM2Q969S9 779 aaKnown RBP12.46□□□□□ -0.41
LINC00642-202ENST00000442515 S100PBPQ96BU1 408 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 SLC35A4Q96G79 324 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 ADOQ96SZ5 270 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 CD244Q9BZW8 370 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 POPDC3Q9HBV1 291 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 MAT2BQ9NZL9 334 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 WHRNQ9P202 907 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 ZNF337Q9Y3M9 751 aa12.46□□□□□ -0.41
LINC00642-202ENST00000442515 MGAM2Q2M2H8 2515 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 PRR14LQ5THK1 2151 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 SS18L1O75177 396 aaPredicted RBP12.45□□□□□ -0.42
LINC00642-202ENST00000442515 REM1O75628 298 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 CBX7O95931 251 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 PLGP00747 810 aaPredicted RBP12.45□□□□□ -0.42
LINC00642-202ENST00000442515 IGHV4-31P0DP07 118 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 CD1DP15813 335 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 HK1P19367 917 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 DRD5P21918 477 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 CFPP27918 469 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 DSCR9P59020 149 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 RPS3AP61247 264 aaKnown RBP12.45□□□□□ -0.42
LINC00642-202ENST00000442515 PRICKLE4Q2TBC4 344 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 CCDC137Q6PK04 289 aaKnown RBP12.45□□□□□ -0.42
LINC00642-202ENST00000442515 DNAJC14Q6Y2X3 702 aaPredicted RBP12.45□□□□□ -0.42
LINC00642-202ENST00000442515 BEND4Q6ZU67 534 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 DTX2Q86UW9 622 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 MEX3DQ86XN8 651 aaKnown RBP12.45□□□□□ -0.42
LINC00642-202ENST00000442515 MYLK4Q86YV6 388 aaPredicted RBP12.45□□□□□ -0.42
LINC00642-202ENST00000442515 FADS6Q8N9I5 356 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 OR52R1Q8NGF1 315 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 RNF138Q8WVD3 245 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 GMPPAQ96IJ6 420 aaPredicted RBP12.45□□□□□ -0.42
LINC00642-202ENST00000442515 TRIM2Q9C040 744 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 MANSC1Q9H8J5 431 aa12.45□□□□□ -0.42
LINC00642-202ENST00000442515 CHODLQ9H9P2 273 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms