RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 TMC8Q8IU68 726 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 TICAM1Q8IUC6 712 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 AQP12AQ8IXF9 295 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SFRP1Q8N474 314 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 MARVELD2Q8N4S9 558 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF557Q8N988 423 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 FNDC5Q8NAU1 212 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 GPR26Q8NDV2 337 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR4F6Q8NGB9 312 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR52B6Q8NGF0 335 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR2T34Q8NGX1 318 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR6K2Q8NGY2 324 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR2T11Q8NH01 316 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OR2T3Q8NH03 318 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC22A18Q96BI1 424 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SCRN2Q96FV2 425 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 LMLNQ96KR4 655 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 PPP3R2Q96LZ3 170 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF641Q96N77 438 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF347Q96SE7 839 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ACOX2Q99424 681 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZBTB18Q99592 522 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 COPS8Q99627 209 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 CENPKQ9BS16 269 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 C1orf50Q9BV19 199 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 YIPF3Q9GZM5 350 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 C11orf49Q9H6J7 331 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 COQ10BQ9H8M1 238 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 RDH14Q9HBH5 336 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 PNRC2Q9NPJ4 139 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC52A3Q9NQ40 469 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ASAH2Q9NR71 780 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ARMC1Q9NVT9 282 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 PKD2L2Q9NZM6 624 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 NDUFA13Q9P0J0 144 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ACTR3BQ9P1U1 418 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 C5AR2Q9P296 337 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OPTCQ9UBM4 332 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC25A13Q9UJS0 675 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF225Q9UK10 706 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 PTBP2Q9UKA9 531 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 CLEC4EQ9ULY5 219 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 EIF3LQ9Y262 564 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 OARD1Q9Y530 152 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 AP4B1Q9Y6B7 739 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 PRSS21Q9Y6M0 314 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF638Q14966 1978 aaKnown RBP3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 VWA8A3KMH1 1905 aa3.25□□□□□ -1.89
HMGB3P11-201ENST00000440127 SHROOM3Q8TF72 1996 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 DHRS12A0PJE2 317 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 GLOD5A6NK44 160 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 LOC730098B7Z3J9 87 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 WASH3PC4AMC7 463 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 C9JVG2 144 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 K7EPI3 171 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 FXYD1O00168 92 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 MANBAO00462 879 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 LSM1O15116 133 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ARPC2O15144 300 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC16A5O15375 505 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CCL16O15467 120 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 RGS14O43566 566 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SPRY3O43610 288 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SEC22BO75396 215 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 GMNNO75496 209 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 STK16O75716 305 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 AP2A2O94973 939 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 TNFAIP8O95379 198 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CLDN9O95484 217 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ADAP00813 363 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 HLA-DQA2P01906 255 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 KRT6AP02538 564 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 KRT6BP04259 564 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 GPIP06744 558 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 C8GP07360 202 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 PRSS2P07478 247 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ANXA5P08758 320 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 HIST1H2AGP0C0S8 130 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 MPC1LP0DKB6 136 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 FCGR1AP12314 374 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SELLP14151 372 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 SLC2A4P14672 509 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ARSBP15848 533 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZNF26P17031 533 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 HOXB9P17482 250 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 POLR2EP19388 210 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 HIST1H2ADP20671 130 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ATP6V1B2P21281 511 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 FASP25445 335 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ITGB8P26012 769 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 HTR1EP28566 365 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 IL12AP29459 219 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 HLA-FP30511 346 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 CA5AP35218 305 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 RPL5P46777 297 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 GNPDA1P46926 289 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 ZFP36L2P47974 494 aaKnown RBP3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 KRT6CP48668 564 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 GSK3BP49841 420 aa3.24□□□□□ -1.89
HMGB3P11-201ENST00000440127 STK19P49842 368 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms