RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 CDKN1AP38936 164 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 CDKN2DP55273 166 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 IL2P60568 153 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 ATP6V0D1P61421 351 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 TIAL1Q01085 375 aaKnown RBP eCLIP10.06□□□□□ -0.84e-7■■■■□ 24.1
CSTF3-203ENST00000438862 SLC18A2Q05940 514 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 TGM3Q08188 693 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 LOXL1Q08397 574 aaPredicted RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 FGFBP1Q14512 234 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 SQLEQ14534 574 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 ADPRMQ3LIE5 342 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 AGBL2Q5U5Z8 902 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 BICRALQ6AI39 1079 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 CYB5R2Q6BCY4 276 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 VWA1Q6PCB0 445 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 ABHD17CQ6PCB6 329 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 TMIGD1Q6UXZ0 262 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 RNF111Q6ZNA4 994 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 TMPRSS11BQ86T26 416 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 TRABD2AQ86V40 505 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 THOC6Q86W42 341 aaKnown RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 MEX3DQ86XN8 651 aaKnown RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 GOLGA6L1Q8N7Z2 621 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 CCT6BQ92526 530 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 TP53INP1Q96A56 240 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 MRRFQ96E11 262 aaKnown RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 ZMYND19Q96E35 227 aaPredicted RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 ZNF845Q96IR2 970 aaPredicted RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 UBXN10Q96LJ8 280 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 HS6ST2Q96MM7 605 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 NDNQ99608 321 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 KRTAP4-8Q9BYQ9 185 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 KLHL4Q9C0H6 718 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 REXO4Q9GZR2 422 aaKnown RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 WWTR1Q9GZV5 400 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 ADAM19Q9H013 955 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 SSU72Q9NP77 194 aaKnown RBP10.06□□□□□ -0.8
CSTF3-203ENST00000438862 SNX15Q9NRS6 342 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 MKS1Q9NXB0 559 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 TBK1Q9UHD2 729 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 DCDC2Q9UHG0 476 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 LIPT1Q9Y234 373 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 MED12Q93074 2177 aa10.06□□□□□ -0.8
CSTF3-203ENST00000438862 A0A096LPK6 155 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 CDC7O00311 574 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 UBFD1O14562 309 aaKnown RBP10.05□□□□□ -0.8
CSTF3-203ENST00000438862 GNB5O14775 395 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 LMX1BO60663 402 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 CBR3O75828 277 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 SASH3O75995 380 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 SOD3P08294 240 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 SLC35E2BP0CK96 405 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 CERS1P27544 350 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 KIR2DL2P43627 348 aaPredicted RBP10.05□□□□□ -0.8
CSTF3-203ENST00000438862 CCT5P48643 541 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 SLC18A1P54219 525 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 FBXW4P57775 412 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 DSCR9P59020 149 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 IGLV3-21P80748 117 aaPredicted RBP10.05□□□□□ -0.8
CSTF3-203ENST00000438862 SETDB1Q15047 1291 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 EBPQ15125 230 aaKnown RBP10.05□□□□□ -0.8
CSTF3-203ENST00000438862 FAM83EQ2M2I3 478 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 TSNAXIP1Q2TAA8 658 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 AAGABQ6PD74 315 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 RAPH1Q70E73 1250 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 CHMP1BQ7LBR1 199 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 TBC1D1Q86TI0 1168 aaPredicted RBP10.05□□□□□ -0.8
CSTF3-203ENST00000438862 ZNF610Q8N9Z0 462 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 OR14L1PQ8NHC6 308 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 SMAP2Q8WU79 429 aaPredicted RBP10.05□□□□□ -0.8
CSTF3-203ENST00000438862 FBXW5Q969U6 566 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 ROGDIQ9GZN7 287 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 DERL2Q9GZP9 239 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 NT5DC2Q9H857 520 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 NMRAL1Q9HBL8 299 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 MED4Q9NPJ6 270 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 PRDM7Q9NQW5 492 aa10.05□□□□□ -0.8
CSTF3-203ENST00000438862 GDF2Q9UK05 429 aaPredicted RBP10.05□□□□□ -0.8
CSTF3-203ENST00000438862 FREM1Q5H8C1 2179 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 A0A096LNT2 108 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 C2orf92A0A1B0GVN3 265 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 ANKDD1BA6NHY2 528 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 SMIM23A6NLE4 172 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 HMGB1P1B2RPK0 211 aaPredicted RBP10.04□□□□□ -0.8
CSTF3-203ENST00000438862 HRKO00198 91 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 OR10H2O60403 315 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 DLX3O60479 287 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 KLHL2O95198 593 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 ENO2P09104 434 aaPredicted RBP10.04□□□□□ -0.8
CSTF3-203ENST00000438862 C1GALT1C1LP0DN25 315 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 EGR1P18146 543 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 KRT4P19013 534 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 CRHR1P34998 444 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 KCNC1P48547 511 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 LHX2P50458 406 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 GFRA1P56159 465 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 NRG3P56975 720 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 SLC37A1P57057 533 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 PLIN5Q00G26 463 aa10.04□□□□□ -0.8
CSTF3-203ENST00000438862 ID2Q02363 134 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms