RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 SGO1Q5FBB7 561 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 Q5PR19 223 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 CHMP1BQ7LBR1 199 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 SIMC1Q8NDZ2 872 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 OR4F6Q8NGB9 312 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF675Q8TD23 568 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF592Q92610 1267 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 TM4SF18Q96CE8 201 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 SLC35A4Q96G79 324 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 COX4I2Q96KJ9 171 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 NSUN5Q96P11 429 aaKnown RBP13.49□□□□□ -0.25
PRKDC-203ENST00000432581 BTBD9Q96Q07 612 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF226Q9NYT6 803 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 SNX6Q9UNH7 406 aa13.49□□□□□ -0.25
PRKDC-203ENST00000432581 GPR55Q9Y2T6 319 aaPredicted RBP13.49□□□□□ -0.25
PRKDC-203ENST00000432581 MED12Q93074 2177 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 FN1P02751 2386 aaKnown RBP13.48□□□□□ -0.25
PRKDC-203ENST00000432581 A0A1B0GTL3 188 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 CTIFO43310 598 aaKnown RBP13.48□□□□□ -0.25
PRKDC-203ENST00000432581 OTCP00480 354 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 FPR1P21462 350 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 PHBP35232 272 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 KRT20P35900 424 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 ALDH9A1P49189 494 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 MRPS22P82650 360 aaKnown RBP13.48□□□□□ -0.25
PRKDC-203ENST00000432581 DUSP2Q05923 314 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 LTB4RQ15722 352 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 PRSS57Q6UWY2 283 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 PLXDC2Q6UX71 529 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 P4HA3Q7Z4N8 544 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 SAMD14Q8IZD0 417 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-203ENST00000432581 PLD6Q8N2A8 252 aaKnown RBP13.48□□□□□ -0.25
PRKDC-203ENST00000432581 SELENOMQ8WWX9 145 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 CNRIP1Q96F85 164 aaPredicted RBP13.48□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF681Q96N22 645 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 ADOQ96SZ5 270 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 PFDN4Q9NQP4 134 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 XPR1Q9UBH6 696 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 UTS2RQ9UKP6 389 aa13.48□□□□□ -0.25
PRKDC-203ENST00000432581 SMNDC1O75940 238 aaKnown RBP eCLIP13.47□□□□□ -0.25
PRKDC-203ENST00000432581 TGM6O95932 706 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 PDYNP01213 254 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 RPS17P08708 135 aaKnown RBP13.47□□□□□ -0.25
PRKDC-203ENST00000432581 GRK2P25098 689 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 DPP4P27487 766 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 IL12BP29460 328 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 CD79BP40259 229 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 MC3RP41968 323 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 MRPS35P82673 323 aaKnown RBP13.47□□□□□ -0.25
PRKDC-203ENST00000432581 FAM27E3Q08E93 113 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 TRADDQ15628 312 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 ERCC6LQ2NKX8 1250 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF628Q5EBL2 1059 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 C1orf52Q8N6N3 182 aaKnown RBP13.47□□□□□ -0.25
PRKDC-203ENST00000432581 OR4K17Q8NGC6 315 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 STARD4Q96DR4 205 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 WFIKKN1Q96NZ8 548 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 GRPEL1Q9HAV7 217 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 FARSBQ9NSD9 589 aaKnown RBP13.47□□□□□ -0.25
PRKDC-203ENST00000432581 C6orf203Q9P0P8 240 aaPredicted RBP13.47□□□□□ -0.25
PRKDC-203ENST00000432581 VPS29Q9UBQ0 182 aa13.47□□□□□ -0.25
PRKDC-203ENST00000432581 DNHD1Q96M86 4753 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 EXPH5Q8NEV8 1989 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 SLC22A20A6NK97 555 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 DEFB108AA8MXU0 73 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 ZIC3O60481 467 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 TSPAN2O60636 221 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 ESRRBO95718 433 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 LY6G6DO95868 133 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 CT45A8P0DMV1 189 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 CT45A9P0DMV2 189 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 COL6A2P12110 1019 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 PEPDP12955 493 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 CRYGSP22914 178 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 MAGEA12P43365 314 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 PNLIPRP2P54317 469 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 DSCR4P56555 118 aaPredicted RBP13.46□□□□□ -0.25
PRKDC-203ENST00000432581 EEFSECP57772 596 aaKnown RBP13.46□□□□□ -0.25
PRKDC-203ENST00000432581 ACKR1Q16570 336 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 CT45A2Q5DJT8 189 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 FAM180BQ6P0A1 224 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 LETMD1Q6P1Q0 360 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 LARP4Q71RC2 724 aaKnown RBP eCLIP13.46□□□□□ -0.25
PRKDC-203ENST00000432581 CCDC116Q8IYX3 515 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 MEIOBQ8N635 442 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 CNEP1R1Q8N9A8 125 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 ZNF483Q8TF39 744 aaPredicted RBP13.46□□□□□ -0.25
PRKDC-203ENST00000432581 NUDT8Q8WV74 236 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 RNF138Q8WVD3 245 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 VSTM2LQ96N03 204 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 FAM111AQ96PZ2 611 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 CCL19Q99731 98 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 MRPL57Q9BQC6 102 aaKnown RBP13.46□□□□□ -0.25
PRKDC-203ENST00000432581 SLC39A3Q9BRY0 314 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 MED18Q9BUE0 208 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 BDH2Q9BUT1 245 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 ACSS3Q9H6R3 686 aa13.46□□□□□ -0.25
PRKDC-203ENST00000432581 KLHL28Q9NXS3 571 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms