RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 CLIP3Q96DZ5 547 aa12.97□□□□□ -0.33
SGMS1-203ENST00000429490 TMPRSS11EQ9UL52 423 aa12.97□□□□□ -0.33
SGMS1-203ENST00000429490 RASD1Q9Y272 281 aa12.97□□□□□ -0.33
SGMS1-203ENST00000429490 NTNG1Q9Y2I2 539 aa12.97□□□□□ -0.33
SGMS1-203ENST00000429490 ZNF236Q9UL36 1845 aa12.97□□□□□ -0.33
SGMS1-203ENST00000429490 ZC3H12DA2A288 527 aaKnown RBP12.96□□□□□ -0.33
SGMS1-203ENST00000429490 LRRC72A6NJI9 287 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 GABRPO00591 440 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 NUPL2O15504 423 aaKnown RBP12.96□□□□□ -0.33
SGMS1-203ENST00000429490 GCM2O75603 506 aaPredicted RBP12.96□□□□□ -0.33
SGMS1-203ENST00000429490 DNASE1P24855 282 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 CRYBB2P43320 205 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 RPS5P46782 204 aaKnown RBP12.96□□□□□ -0.33
SGMS1-203ENST00000429490 OR3A3P47888 321 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 SGCGQ13326 291 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 IRF5Q13568 498 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 ODF4Q2M2E3 257 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 MLIPQ5VWP3 458 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 FAM71E1Q6IPT2 247 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 SMAP2Q8WU79 429 aaPredicted RBP12.96□□□□□ -0.33
SGMS1-203ENST00000429490 DHRS1Q96LJ7 313 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 MKRN2Q9H000 416 aaKnown RBP12.96□□□□□ -0.33
SGMS1-203ENST00000429490 SPHK2Q9NRA0 654 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 PAPPA2Q9BXP8 1791 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 GREB1Q4ZG55 1949 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 HCN1O60741 890 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 NTN1O95631 604 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 ACADMP11310 421 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 SRP9P49458 86 aaKnown RBP12.96□□□□□ -0.33
SGMS1-203ENST00000429490 CLDN2P57739 230 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 BTN3A2P78410 334 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 ZNF79Q15937 498 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 PLK5Q496M5 336 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 DCUN1D3Q8IWE4 304 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 ACBD7Q8N6N7 88 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 OR4C6Q8NH72 309 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 FBLIM1Q8WUP2 373 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 DNAJA3Q96EY1 480 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 GSDMCQ9BYG8 508 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 TMEM38AQ9H6F2 299 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 KLHL42Q9P2K6 505 aa12.96□□□□□ -0.33
SGMS1-203ENST00000429490 TEX13CA0A0J9YWL9 993 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 HEPACAM2A8MVW5 462 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 PLPP1O14494 284 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 PAK4O96013 591 aaPredicted RBP12.96□□□□□ -0.34
SGMS1-203ENST00000429490 C6P13671 934 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 MPIP34949 423 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 PTGS2P35354 604 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 NAA10P41227 235 aaPredicted RBP12.96□□□□□ -0.34
SGMS1-203ENST00000429490 MAPK9P45984 424 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 FAM27D1Q5T7N8 215 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 RASSF6Q6ZTQ3 369 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 OR56A3Q8NH54 315 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 ALG14Q96F25 216 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 RIPOR3Q96MK2 946 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 THAP7Q9BT49 309 aaPredicted RBP12.96□□□□□ -0.34
SGMS1-203ENST00000429490 DPH1Q9BZG8 443 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 SLC35C2Q9NQQ7 365 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 DEC1Q9P2X7 70 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 RPS6KB2Q9UBS0 482 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 WDR45Q9Y484 360 aa12.96□□□□□ -0.34
SGMS1-203ENST00000429490 RIIAD1A6NNX1 92 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 PSMD9O00233 223 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SOCS6O14544 535 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 NT5EP21589 574 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 GIFP27352 417 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SHC1P29353 583 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 CRYBA2P53672 197 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 PARS2Q7L3T8 475 aaKnown RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 OR2T35Q8NGX2 323 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 HYLS1Q96M11 299 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 FUZQ9BT04 418 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 TRIM36Q9NQ86 728 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 TM7SF3Q9NS93 570 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 FTSJ1Q9UET6 329 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 A0A0G2JMZ2 1700 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 LRRC37A2A6NM11 1700 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 TET1Q8NFU7 2136 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 NPIPA5A0A0B4J1W7 369 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 PRAMEF25A6NGN4 478 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 NPIPA7E9PJI5 369 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 HYAL3O43820 417 aaPredicted RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 RPP14O95059 124 aaKnown RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SLC2A10O95528 541 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 NPIPA8P0DM63 369 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 MC3RP41968 323 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SLC1A3P43003 542 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 VSX2P58304 361 aaPredicted RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 CHRNEQ04844 493 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 TRIM71Q2Q1W2 868 aaKnown RBP12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SLC25A25Q6KCM7 469 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 ZNF613Q6PF04 617 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SYT9Q86SS6 491 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 ATCAYQ86WG3 371 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 SERPINA12Q8IW75 414 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 OR2T33Q8NG76 320 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 PPP1R16AQ96I34 528 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 CAMK1GQ96NX5 476 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 GON7Q9BXV9 100 aa12.95□□□□□ -0.34
SGMS1-203ENST00000429490 PLA2G12AQ9BZM1 189 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms