RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TPST2O60704 377 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 SCG5P05408 212 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 IGFBP1P08833 259 aaPredicted RBP12.83□□□□□ -0.35
THBS3-202ENST00000428962 CCNYL3P0C7X3 344 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 SMIM10L1P0DMW3 83 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 POU3F3P20264 500 aaPredicted RBP12.83□□□□□ -0.35
THBS3-202ENST00000428962 ACSL1P33121 698 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 TPMTP51580 245 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 CHRNEQ04844 493 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 GINS1Q14691 196 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 OXA1LQ15070 435 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 LTB4RQ15722 352 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 ALG11Q2TAA5 492 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 TPRG1LQ5T0D9 272 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 HEPHL1Q6MZM0 1159 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 MFSD12Q6NUT3 480 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 FBXO42Q6P3S6 717 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 RRM2BQ7LG56 351 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 BTLAQ7Z6A9 289 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 TRIM73Q86UV7 250 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 SLC34A3Q8N130 599 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 TOR1AIP2Q8NFQ8 470 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 OR9Q1Q8NGQ5 310 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 CCL4L1Q8NHW4 92 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 ZCCHC10Q8TBK6 192 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 SNRNP27Q8WVK2 155 aaKnown RBP12.83□□□□□ -0.35
THBS3-202ENST00000428962 RSC1A1Q92681 617 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 RERGQ96A58 199 aaPredicted RBP12.83□□□□□ -0.35
THBS3-202ENST00000428962 SMIM10Q96HG1 83 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 FCRL4Q96PJ5 515 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 TAPBPLQ9BX59 468 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 LYRM4Q9HD34 91 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 POT1Q9NUX5 634 aa12.83□□□□□ -0.35
THBS3-202ENST00000428962 CHCHD3Q9NX63 227 aaKnown RBP12.83□□□□□ -0.35
THBS3-202ENST00000428962 TRANK1O15050 2925 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 FUOMA2VDF0 154 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 OR6C74A6NCV1 312 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 FAM170BA6NMN3 283 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 C2orf74A8MZ97 194 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 MYL12BO14950 172 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 CYP7B1O75881 506 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 COL4A2P08572 1712 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 GRK5P34947 590 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 GIPRP48546 466 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 LIMK1P53667 647 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 RGS8P57771 180 aaPredicted RBP12.83□□□□□ -0.36
THBS3-202ENST00000428962 CDK5Q00535 292 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 TSPAN31Q12999 210 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 GPR18Q14330 331 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 DEFB134Q4QY38 66 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 EIPR1Q53HC9 387 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 FIGLAQ6QHK4 219 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 ZNF730Q6ZMV8 503 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 GDPGP1Q6ZNW5 385 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 OR2L13Q8N349 312 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 OR52P1PQ8NH57 321 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 OR10G6Q8NH81 332 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 PIGXQ8TBF5 258 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 DIO2Q92813 273 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 SLC38A2Q96QD8 506 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 ZFYVE21Q9BQ24 234 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 TEX12Q9BXU0 123 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 C6orf62Q9GZU0 229 aaPredicted RBP12.83□□□□□ -0.36
THBS3-202ENST00000428962 QRSL1Q9H0R6 528 aaKnown RBP12.83□□□□□ -0.36
THBS3-202ENST00000428962 KRCC1Q9NPI7 259 aaPredicted RBP12.83□□□□□ -0.36
THBS3-202ENST00000428962 KCMF1Q9P0J7 381 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 ZNF232Q9UNY5 417 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 LSM2Q9Y333 95 aaKnown RBP12.83□□□□□ -0.36
THBS3-202ENST00000428962 PEX16Q9Y5Y5 336 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 HS3ST3A1Q9Y663 406 aa12.83□□□□□ -0.36
THBS3-202ENST00000428962 TRBV23OR9-2A0A075B6M9 112 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 TCRBV21S2A2A0A5A6 115 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 AGAP5A6NIR3 686 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 ARHGAP33O14559 1287 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 ZSCAN9O15535 394 aaPredicted RBP12.82□□□□□ -0.36
THBS3-202ENST00000428962 P2RX6O15547 441 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 TLX2O43763 284 aaPredicted RBP12.82□□□□□ -0.36
THBS3-202ENST00000428962 PRKYO43930 277 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 RAB36O95755 333 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
THBS3-202ENST00000428962 ENDOUP21128 410 aaKnown RBP12.82□□□□□ -0.36
THBS3-202ENST00000428962 RABIFP47224 123 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 BCAP31P51572 246 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 PSMD7P51665 324 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 ZNF45Q02386 682 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 DLX2Q07687 328 aaPredicted RBP12.82□□□□□ -0.36
THBS3-202ENST00000428962 LARS2Q15031 903 aaKnown RBP12.82□□□□□ -0.36
THBS3-202ENST00000428962 SPHARQ15513 63 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 KLHL22Q53GT1 634 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 PERM1Q5SV97 790 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 SLC27A4Q6P1M0 643 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 FAM111BQ6SJ93 734 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 SLC36A4Q6YBV0 504 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 PLEKHM3Q6ZWE6 761 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 USP53Q70EK8 1073 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 HMGN2P46Q86SG4 172 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 ATCAYQ86WG3 371 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 VRK2Q86Y07 508 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 PEX5LQ8IYB4 626 aa12.82□□□□□ -0.36
THBS3-202ENST00000428962 CYP4Z2PQ8N1L4 340 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms