RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 F10P00742 488 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 CREB1P16220 341 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 ENDOUP21128 410 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 ARRB2P32121 409 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 HPCAL1P37235 193 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PEX19P40855 299 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 MRPL19P49406 292 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PCYT1AP49585 367 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 NCBP2P52298 156 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 CLDN8P56748 225 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PPIAP62937 165 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 KCNJ2P63252 427 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 EEF1A1P68104 462 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PRR5P85299 388 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 DUSP8Q13202 625 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 GANABQ14697 944 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 ZNHIT3Q15649 155 aaPredicted RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 LSM12Q3MHD2 195 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 GLYR1Q49A26 553 aaPredicted RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 EEF1A1P5Q5VTE0 462 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 TIGD3Q6B0B8 471 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 FAM111BQ6SJ93 734 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 ACAD11Q709F0 780 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PM20D2Q8IYS1 436 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 TMEM251Q8N6I4 163 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 OR7G2Q8NG99 324 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 OR10G3Q8NGC4 313 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PPP1R14CQ8TAE6 165 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 NEIL3Q8TAT5 605 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 SFXN5Q8TD22 340 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 DIO2Q92813 273 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 UCN3Q969E3 161 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 TESCQ96BS2 214 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PPCDCQ96CD2 204 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 COL21A1Q96P44 957 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 UCN2Q96RP3 112 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 GAL3ST4Q96RP7 486 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 STACQ99469 402 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 DOHHQ9BU89 302 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 MECRQ9BV79 373 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 ITPAQ9BY32 194 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 C12orf65Q9H3J6 166 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 RUBCNLQ9H714 662 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 MEAF6Q9HAF1 191 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 TMBIM4Q9HC24 238 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 Q9N2J8 555 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 DDX18Q9NVP1 670 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 ARGLU1Q9NWB6 273 aaPredicted RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 BCAP29Q9UHQ4 241 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 ZDHHC2Q9UIJ5 367 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 NPIPA1Q9UND3 350 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 EIF3LQ9Y262 564 aaKnown RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 POLR3HQ9Y535 204 aaPredicted RBP8.38□□□□□ -1.07
SMC1A-203ENST00000428014 NINQ8N4C6 2090 aa8.38□□□□□ -1.07
SMC1A-203ENST00000428014 PHF3Q92576 2039 aaKnown RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 IGLV3-32A0A0A0MS00 114 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 A0A1W2PS29 197 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 TMEM120BA0PK00 339 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 TRPC5OSA6NMA1 111 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 POM121CA8CG34 1229 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 AHRRA9YTQ3 701 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 RNASET2O00584 256 aaKnown RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 HDAC3O15379 428 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 HS6ST1O60243 411 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 NKX2-2O95096 273 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 ACTL6AO96019 429 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 LINC00032P0C843 101 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 ABOP16442 354 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 TACR1P25103 407 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 GCKP35557 465 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 KRT20P35900 424 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 PIGAP37287 484 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 SLC1A6P48664 564 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 CDK9P50750 372 aaKnown RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 CLNS1AP54105 237 aaKnown RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 KCNK10P57789 538 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 RPL38P63173 70 aaKnown RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 PMP22Q01453 160 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 PLGLB1Q02325 96 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 DUSP2Q05923 314 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 PLCXD2Q0VAA5 305 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 STX3Q13277 289 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 MPP2Q14168 576 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 CASP8Q14790 479 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 CHI3L2Q15782 390 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 BCL2A1Q16548 175 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 DECR1Q16698 335 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 ZNF750Q32MQ0 723 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 FNDC7Q5VTL7 733 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 DOLPP1Q86YN1 238 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 MISPQ8IVT2 679 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 DDIASQ8IXT1 998 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 GLB1L3Q8NCI6 653 aaPredicted RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 VPS37AQ8NEZ2 397 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 OR9A2Q8NGT5 310 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 GOT1L1Q8NHS2 421 aaPredicted RBP8.37□□□□□ -1.07
SMC1A-203ENST00000428014 ASB5Q8WWX0 329 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 OR5P2Q8WZ92 322 aa8.37□□□□□ -1.07
SMC1A-203ENST00000428014 PMM1Q92871 262 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms