RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 H1F0P07305 194 aaKnown RBP24.72■■□□□ 1.55
LDB1-202ENST00000425280 CBLP22681 906 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 MAP3K8P41279 467 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 RBM48Q5RL73 367 aaKnown RBP24.72■■□□□ 1.55
LDB1-202ENST00000425280 TYW3Q6IPR3 259 aaKnown RBP24.72■■□□□ 1.55
LDB1-202ENST00000425280 SETD9Q8NE22 299 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 OR4C6Q8NH72 309 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 OR1L3Q8NH93 324 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 PITX2Q99697 317 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 ALOXE3Q9BYJ1 711 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 DUSP22Q9NRW4 184 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 WDR45Q9Y484 360 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 CHST2Q9Y4C5 530 aa24.72■■□□□ 1.55
LDB1-202ENST00000425280 LY6G6EA0A0G2JKS1 128 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 OR2W5A6NFC9 320 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 FOLR1P15328 257 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 S1PR1P21453 382 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 HLCSP50747 726 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 RPP38P78345 283 aaKnown RBP24.71■■□□□ 1.55
LDB1-202ENST00000425280 IL5RAQ01344 420 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 PIN1Q13526 163 aaPredicted RBP24.71■■□□□ 1.55
LDB1-202ENST00000425280 NPTX1Q15818 432 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 FGD3Q5JSP0 725 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 PEAR1Q5VY43 1037 aaPredicted RBP24.71■■□□□ 1.55
LDB1-202ENST00000425280 ZNF770Q6IQ21 691 aaPredicted RBP24.71■■□□□ 1.55
LDB1-202ENST00000425280 GALNT12Q8IXK2 581 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 OR52R1Q8NGF1 315 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 OR52P1PQ8NH57 321 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 STACQ99469 402 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 ADNPQ9H2P0 1102 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 MTHFD2LQ9H903 347 aaPredicted RBP24.71■■□□□ 1.55
LDB1-202ENST00000425280 MAU2Q9Y6X3 613 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 U3KQA8 63 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 SMIM31A0A1B0GVY4 71 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 OR6B1O95007 311 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 ELAVL4P26378 380 aaKnown RBP24.71■■□□□ 1.55
LDB1-202ENST00000425280 ALDH3B2P48448 385 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 NR0B2Q15466 257 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 CCNJQ5T5M9 372 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 DHRS4L2Q6PKH6 230 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 TTLL10Q6ZVT0 673 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 TSPYL5Q86VY4 417 aaPredicted RBP24.71■■□□□ 1.55
LDB1-202ENST00000425280 PIK3R3Q92569 461 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 ARHGDIGQ99819 225 aa24.71■■□□□ 1.55
LDB1-202ENST00000425280 CFIP05156 583 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 MAOAP21397 527 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 CRHBPP24387 322 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 PRKAR1BP31321 381 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 SEC23BQ15437 767 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 KMT5CQ86Y97 462 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 AQP11Q8NBQ7 271 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 RIT1Q92963 219 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 RBM18Q96H35 190 aaKnown RBP24.7■■□□□ 1.54
LDB1-202ENST00000425280 ZNF350Q9GZX5 532 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 NDUFA13Q9P0J0 144 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 TMCC3Q9ULS5 477 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 SATB2Q9UPW6 733 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 GPR55Q9Y2T6 319 aaPredicted RBP24.7■■□□□ 1.54
LDB1-202ENST00000425280 HSPE1-MOB4S4R3N1 261 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 PNLIPP16233 465 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 AGXTP21549 392 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 SMIM11AP58511 58 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 CDK5R2Q13319 367 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 DCST2Q5T1A1 773 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 GUSBP11Q6P575 273 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 CCDC71Q8IV32 467 aaPredicted RBP24.7■■□□□ 1.54
LDB1-202ENST00000425280 COX18Q8N8Q8 333 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 HOXB13Q92826 284 aaPredicted RBP24.7■■□□□ 1.54
LDB1-202ENST00000425280 APOL4Q9BPW4 351 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 FUZQ9BT04 418 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 ZNF556Q9HAH1 456 aa24.7■■□□□ 1.54
LDB1-202ENST00000425280 VGLL3A8MV65 326 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 SIGLEC6O43699 453 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 COQ9O75208 318 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 UGT2B17O75795 530 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 GASTP01350 101 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 GCGRP47871 477 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 HSD17B7P56937 341 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 DCST1Q5T197 706 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 CNIH3Q8TBE1 160 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 GPR151Q8TDV0 419 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 ADAMTS16Q8TE57 1224 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 GTPBP3Q969Y2 492 aaKnown RBP24.69■■□□□ 1.54
LDB1-202ENST00000425280 ZC3H10Q96K80 434 aaKnown RBP24.69■■□□□ 1.54
LDB1-202ENST00000425280 HRASLS5Q96KN8 279 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 GAREM1Q9H706 876 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 TRIM45Q9H8W5 580 aaPredicted RBP24.69■■□□□ 1.54
LDB1-202ENST00000425280 SLC13A4Q9UKG4 626 aa24.69■■□□□ 1.54
LDB1-202ENST00000425280 CPED1A4D0V7 1026 aa24.68■■□□□ 1.54
LDB1-202ENST00000425280 ZNF749O43361 778 aa24.68■■□□□ 1.54
LDB1-202ENST00000425280 HYAL3O43820 417 aaPredicted RBP24.68■■□□□ 1.54
LDB1-202ENST00000425280 POU2F1P14859 743 aa24.68■■□□□ 1.54
LDB1-202ENST00000425280 ZNF155Q12901 538 aaPredicted RBP24.68■■□□□ 1.54
LDB1-202ENST00000425280 PERM1Q5SV97 790 aa24.68■■□□□ 1.54
LDB1-202ENST00000425280 PRAMEF17Q5VTA0 474 aa24.68■■□□□ 1.54
LDB1-202ENST00000425280 Q6ZPB1 254 aaPredicted RBP24.68■■□□□ 1.54
LDB1-202ENST00000425280 TMEM105Q8N8V8 129 aa24.68■■□□□ 1.54
LDB1-202ENST00000425280 PRRC1Q96M27 445 aa24.68■■□□□ 1.54
LDB1-202ENST00000425280 DGAT2Q96PD7 388 aa24.68■■□□□ 1.54
LDB1-202ENST00000425280 CXorf56Q9H5V9 222 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms