RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 BDH2Q9BUT1 245 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 ELOVL6Q9H5J4 265 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 ZNF226Q9NYT6 803 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 C6orf203Q9P0P8 240 aaPredicted RBP15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 FBXL2Q9UKC9 423 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 PCTPQ9UKL6 214 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 WIF1Q9Y5W5 379 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 ZNF780BQ9Y6R6 833 aa15.27■□□□□ 0.04
UPF3AP3-201ENST00000420996 DEFB108AA8MXU0 73 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 SIAH2O43255 324 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 SMNDC1O75940 238 aaKnown RBP eCLIP15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 ALDOAP04075 364 aaKnown RBP15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 RBP1P09455 135 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 PCSK2P16519 638 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 FPR1P21462 350 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 CD79BP40259 229 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 SERPINB8P50452 374 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 GALNT1Q10472 559 aaPredicted RBP15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 LTB4RQ15722 352 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 ACKR1Q16570 336 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 OR2A2Q6IF42 318 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 P4HA3Q7Z4N8 544 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 MILR1Q7Z6M3 343 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 PLD6Q8N2A8 252 aaKnown RBP15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 CIARTQ8N365 385 aaPredicted RBP15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 GBP7Q8N8V2 638 aaPredicted RBP15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 CNRIP1Q96F85 164 aaPredicted RBP15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 Q96MF0 132 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 NSUN5Q96P11 429 aaKnown RBP15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 BTBD9Q96Q07 612 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 FAIM2Q9BWQ8 316 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 RAB17Q9H0T7 212 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 VPS11Q9H270 941 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 KLHL28Q9NXS3 571 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 DKKL1Q9UK85 242 aa15.26■□□□□ 0.03
UPF3AP3-201ENST00000420996 ZIC3O60481 467 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 TSPAN2O60636 221 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 BCAS2O75934 225 aaPredicted RBP15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 CT45A8P0DMV1 189 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 CT45A9P0DMV2 189 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 CRYGSP22914 178 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 DPP4P27487 766 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 TRA2BP62995 288 aaKnown RBP15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 MRPS35P82673 323 aaKnown RBP15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 EFR3AQ14156 821 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 TRADDQ15628 312 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 UAP1Q16222 522 aaPredicted RBP15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 CT45A2Q5DJT8 189 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 ZDHHC24Q6UX98 284 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 CHMP1BQ7LBR1 199 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 PRIMA1Q86XR5 153 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 OR4F6Q8NGB9 312 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 ZNF675Q8TD23 568 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 ERP27Q96DN0 273 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 PGM2Q96G03 612 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 FAM111AQ96PZ2 611 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 ADOQ96SZ5 270 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 MED18Q9BUE0 208 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 BRF2Q9HAW0 419 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 FARSBQ9NSD9 589 aaKnown RBP15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 DSCAMO60469 2012 aa15.25■□□□□ 0.03
UPF3AP3-201ENST00000420996 SMIM24O75264 130 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 PDYNP01213 254 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 GRK2P25098 689 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 ALDH9A1P49189 494 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 B3GALT5-AS1P59052 145 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 PSPHP78330 225 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 C2orf54Q08AI8 447 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 OR5M10Q6IEU7 315 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 FAM180BQ6P0A1 224 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 VWA1Q6PCB0 445 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 ZNF474Q6S9Z5 364 aaPredicted RBP15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 BTLAQ7Z6A9 289 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 CNEP1R1Q8N9A8 125 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 RNF138Q8WVD3 245 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 SELENOMQ8WWX9 145 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 PIK3IP1Q96FE7 263 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 CCL19Q99731 98 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 NMRK1Q9NWW6 199 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 ELOVL5Q9NYP7 299 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 UTS2RQ9UKP6 389 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 HEATR5AQ86XA9 2040 aa15.24■□□□□ 0.03
UPF3AP3-201ENST00000420996 RAI1Q7Z5J4 1906 aaPredicted RBP15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 SLC22A20A6NK97 555 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 OTCP00480 354 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 PEPDP12955 493 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 IL12BP29460 328 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 KRT20P35900 424 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 UGT2B10P36537 528 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 KIR2DL2P43627 348 aaPredicted RBP15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 PNLIPRP2P54317 469 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 GAS1P54826 345 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 DSCR4P56555 118 aaPredicted RBP15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 CORO7P57737 925 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 ZNF628Q5EBL2 1059 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 C20orf204Q6ZNR8 217 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 LARP4Q71RC2 724 aaKnown RBP eCLIP15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 YTHDF3Q7Z739 585 aaKnown RBP15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 CCDC116Q8IYX3 515 aa15.23■□□□□ 0.03
UPF3AP3-201ENST00000420996 C1orf52Q8N6N3 182 aaKnown RBP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms