RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 CAPN14A8MX76 684 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 KLRC4-KLRK1H3BQV0 150 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 UBDO15205 165 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 POLR3GO15318 223 aaPredicted RBP17.14■□□□□ 0.33
PTCD3-204ENST00000418628 PEX1O43933 1283 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 TSPAN2O60636 221 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 CRYABP02511 175 aaKnown RBP17.14■□□□□ 0.33
PTCD3-204ENST00000418628 MST1P26927 711 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 GPC1P35052 558 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 GUCY1A3Q02108 690 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 PLCXD2Q0VAA5 305 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 FAM174BQ3ZCQ3 159 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 SLC22A10Q63ZE4 541 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 NXNQ6DKJ4 435 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 CGB2Q6NT52 195 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 ACAD11Q709F0 780 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.14■□□□□ 0.33
PTCD3-204ENST00000418628 CLECL1Q8IZS7 167 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 FAM98AQ8NCA5 519 aaKnown RBP17.14■□□□□ 0.33
PTCD3-204ENST00000418628 GLB1L3Q8NCI6 653 aaPredicted RBP17.14■□□□□ 0.33
PTCD3-204ENST00000418628 ST6GALNAC3Q8NDV1 305 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 NUP43Q8NFH3 380 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 OR2M7Q8NG81 312 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 SPPL2AQ8TCT8 520 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 OLAHQ9NV23 265 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 GPATCH2Q9NW75 528 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 CNIH4Q9P003 139 aa17.14■□□□□ 0.33
PTCD3-204ENST00000418628 OR6C70A6NIJ9 312 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 ADAM10O14672 748 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 UGT2B11O75310 529 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 GLSO94925 669 aaPredicted RBP17.13■□□□□ 0.33
PTCD3-204ENST00000418628 NKX2-2O95096 273 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 CBX6O95503 412 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 EDN3P14138 238 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 CNR1P21554 472 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 GPR85P60893 370 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 PRR5P85299 388 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 HYAL4Q2M3T9 481 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 PGS1Q32NB8 556 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 ZCCHC12Q6PEW1 402 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 CDRT4Q8N9R6 151 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 OR4N2Q8NGD1 307 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 GOT1L1Q8NHS2 421 aaPredicted RBP17.13■□□□□ 0.33
PTCD3-204ENST00000418628 TMBIM1Q969X1 311 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 CCDC115Q96NT0 180 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 C3orf14Q9HBI5 128 aa17.13■□□□□ 0.33
PTCD3-204ENST00000418628 PRSS51A0A1B0GVH4 220 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 LRRC3CA6NJW4 275 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 C9JVG2 144 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 TP53I11O14683 189 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 ABCB7O75027 752 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 WISP2O76076 250 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 PGRP06401 933 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 ACP2P11117 423 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 MDH1P40925 334 aaKnown RBP17.12■□□□□ 0.33
PTCD3-204ENST00000418628 PTGDSP41222 190 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 NME5P56597 212 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 CYP27C1Q4G0S4 372 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 ANXA8L1Q5VT79 327 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 DESI1Q6ICB0 168 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 NUP54Q7Z3B4 507 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 WDR53Q7Z5U6 358 aaPredicted RBP17.12■□□□□ 0.33
PTCD3-204ENST00000418628 SLC44A2Q8IWA5 706 aaPredicted RBP17.12■□□□□ 0.33
PTCD3-204ENST00000418628 FAM13CQ8NE31 585 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 OR56A1Q8NGH5 318 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 OR9I1Q8NGQ6 314 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 RFWD2Q8NHY2 731 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 MOAP1Q96BY2 351 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 MAGED4Q96JG8 741 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 FAM173AQ9BQD7 235 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 ZNF385DQ9H6B1 395 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 ZCCHC3Q9NUD5 404 aaKnown RBP17.12■□□□□ 0.33
PTCD3-204ENST00000418628 GIN1Q9NXP7 522 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 BTNL2Q9UIR0 455 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 DOPEY2Q9Y3R5 2298 aa17.12■□□□□ 0.33
PTCD3-204ENST00000418628 PYCARD-AS1I3L0S3 204 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 TRIM3O75382 744 aaPredicted RBP17.11■□□□□ 0.33
PTCD3-204ENST00000418628 SLC22A3O75751 556 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 P04436 131 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 HMGN2P05204 90 aaKnown RBP17.11■□□□□ 0.33
PTCD3-204ENST00000418628 ZNF24P17028 368 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 PIGAP37287 484 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 UQCRFS1P47985 274 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 DNASE1L1P49184 302 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 CCT3P49368 545 aaKnown RBP17.11■□□□□ 0.33
PTCD3-204ENST00000418628 MAN2A2P49641 1150 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 ATP4BP51164 291 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 PNLIPRP2P54317 469 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 IRX1P78414 480 aaPredicted RBP17.11■□□□□ 0.33
PTCD3-204ENST00000418628 TBCELQ5QJ74 424 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 FNDC7Q5VTL7 733 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 GK5Q6ZS86 529 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 MSANTD1Q6ZTZ1 278 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 ANKRD46Q86W74 232 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 SLC16A11Q8NCK7 471 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 DIO2Q92813 273 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 ZNF317Q96PQ6 595 aaPredicted RBP17.11■□□□□ 0.33
PTCD3-204ENST00000418628 NODALQ96S42 347 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 ANGPTL4Q9BY76 406 aa17.11■□□□□ 0.33
PTCD3-204ENST00000418628 TTTY12Q9BZ98 90 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms