RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 TMPRSS13Q9BYE2 586 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 ASB8Q9H765 288 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 EVA1AQ9H8M9 152 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 DNAJC11Q9NVH1 559 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 RPS6KB2Q9UBS0 482 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 PRKAG2Q9UGJ0 569 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 NDRG3Q9UGV2 375 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 CHST2Q9Y4C5 530 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 MAP4K5Q9Y4K4 846 aa7.57□□□□□ -1.2
HMGXB4-202ENST00000418170 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 PQLC2LA1A4F0 135 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 MGAT4DA6NG13 374 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 ANKDD1BA6NHY2 528 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 ANXA2P2A6NMY6 339 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 MCRIP1C9JLW8 97 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 H7C2Y5 167 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 DVL2O14641 736 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 C6orf47O95873 294 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 TBX18O95935 607 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 CD3GP09693 182 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 CD22P20273 847 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 MEOX2P50222 304 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 HLXQ14774 488 aaPredicted RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 FAM209BQ5JX69 171 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 CD300LDQ6UXZ3 194 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 ZNF600Q6ZNG1 722 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 UBE2R2Q712K3 238 aaPredicted RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 NAXDQ8IW45 347 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC7A13Q8TCU3 470 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 FOXJ1Q92949 421 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 CXorf40BQ96DE9 158 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 C20orf85Q9H1P6 137 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 ESRP2Q9H6T0 727 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 NPDC1Q9NQX5 325 aaPredicted RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 PIPOXQ9P0Z9 390 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 RBPJLQ9UBG7 517 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 AFF4Q9UHB7 1163 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 FBXW2Q9UKT8 454 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 ZFR2Q9UPR6 939 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 TEX46H3BTG2 121 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 IGLV3-27P01718 113 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SMIM10L2AP0DMW4 78 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SMIM10L2BP0DMW5 78 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 ACRV1P26436 265 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 MAZP56270 477 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SHC2P98077 582 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 DDX39BQ13838 428 aaKnown RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 COL19A1Q14993 1142 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 LIPJQ5W064 366 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC22A10Q63ZE4 541 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 NCEH1Q6PIU2 408 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 IKBIPQ70UQ0 350 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 RNF180Q86T96 592 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 ADGRG2Q8IZP9 1017 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 ASB12Q8WXK4 309 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 LRRC46Q96FV0 321 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 BEX1Q9HBH7 125 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 TRBV5-4A0A0C4DH59 114 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 KDELR3O43731 214 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 PRAF2O60831 178 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SDC3O75056 442 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 NME6O75414 186 aaPredicted RBP7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 RP2O75695 350 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 OR5F1O95221 314 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SDHBP21912 280 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 CSKP41240 450 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 MMP15P51511 669 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 NDUFA9Q16795 377 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC27A4Q6P1M0 643 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SLITRK4Q8IW52 837 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 PDZD9Q8IXQ8 264 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 KLHDC9Q8NEP7 349 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 GPR32P1Q8NGA4 272 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC12A9Q9BXP2 914 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 CHIAQ9BZP6 476 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 CA5BQ9Y2D0 317 aa7.56□□□□□ -1.2
HMGXB4-202ENST00000418170 A0A0G2JLL6 359 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 CARNS1A5YM72 827 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 UGDHO60701 494 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 GALR3O60755 368 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 FZD7O75084 574 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 RGS9O75916 674 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 B3GAT3O94766 335 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 ETHE1O95571 254 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 MT-ND4P03905 459 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 ANKRD34CP0C6C1 535 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 TACR2P21452 398 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 S100A11P31949 105 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 HAAOP46952 286 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 ATP13A5Q4VNC0 1218 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 REEP3Q6NUK4 255 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 Q6ZTK2 550 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 PRRT2Q7Z6L0 340 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 POGLUT1Q8NBL1 392 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 FBXO15Q8NCQ5 510 aaPredicted RBP7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 SLC5A11Q8WWX8 675 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 DMRTA2Q96SC8 542 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 YIPF4Q9BSR8 244 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 MARCH2Q9P0N8 246 aa7.55□□□□□ -1.2
HMGXB4-202ENST00000418170 MLXQ9UH92 298 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms