RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 SPPL2AQ8TCT8 520 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 DIO2Q92813 273 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 SLC35A4Q96G79 324 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 ZNF597Q96LX8 424 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 COL21A1Q96P44 957 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 TAAR6Q96RI8 345 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 DOHHQ9BU89 302 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 HES7Q9BYE0 225 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 TRIM4Q9C037 500 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 RMND5AQ9H871 391 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 METTL7AQ9H8H3 244 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 SH2D2AQ9NP31 389 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 EQTNQ9NQ60 294 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 GIN1Q9NXP7 522 aa13.48□□□□□ -0.25
LIMS1-206ENST00000414829 CHCHD2Q9Y6H1 151 aaPredicted RBP13.48□□□□□ -0.25
LIMS1-206ENST00000414829 WISP1O95388 367 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 PGRP06401 933 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 VIMP08670 466 aaKnown RBP13.47□□□□□ -0.25
LIMS1-206ENST00000414829 ALOX5P09917 674 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 CT45A8P0DMV1 189 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 CT45A9P0DMV2 189 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 CCL3P10147 92 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 ELAVL4P26378 380 aaKnown RBP13.47□□□□□ -0.25
LIMS1-206ENST00000414829 CCT3P49368 545 aaKnown RBP13.47□□□□□ -0.25
LIMS1-206ENST00000414829 ATP4BP51164 291 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 PRKAG1P54619 331 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 PSG6Q00889 435 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 CT45A2Q5DJT8 189 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 SPANXN4Q5MJ08 99 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 ZNF324BQ6AW86 544 aaPredicted RBP13.47□□□□□ -0.25
LIMS1-206ENST00000414829 OR4F3Q6IEY1 312 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 MFSD12Q6NUT3 480 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 PAOXQ6QHF9 649 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 PACS2Q86VP3 889 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 OR4A15Q8NGL6 344 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 JADE3Q92613 823 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 HOXB13Q92826 284 aaPredicted RBP13.47□□□□□ -0.25
LIMS1-206ENST00000414829 TMBIM1Q969X1 311 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 FAM120BQ96EK7 910 aaKnown RBP13.47□□□□□ -0.25
LIMS1-206ENST00000414829 OR52B2Q96RD2 323 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 STACQ99469 402 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 ANKRA2Q9H9E1 313 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 IL1RL2Q9HB29 575 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 NPHS2Q9NP85 383 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 DUSP22Q9NRW4 184 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 SIRT3Q9NTG7 399 aaPredicted RBP13.47□□□□□ -0.25
LIMS1-206ENST00000414829 BTNL2Q9UIR0 455 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 CBLCQ9ULV8 474 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 CNTRLQ7Z7A1 2325 aa13.47□□□□□ -0.25
LIMS1-206ENST00000414829 TNRC6AQ8NDV7 1962 aaKnown RBP13.46□□□□□ -0.25
LIMS1-206ENST00000414829 ANKUB1A6NFN9 424 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 DUXAA6NLW8 204 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 ZNF354AO60765 605 aaPredicted RBP13.46□□□□□ -0.25
LIMS1-206ENST00000414829 REM1O75628 298 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 AGR2O95994 175 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 AK1P00568 194 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 ABCB1P08183 1280 aaPredicted RBP13.46□□□□□ -0.25
LIMS1-206ENST00000414829 PIGAP37287 484 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 MAGEA8P43361 318 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 MASP1P48740 699 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 CLK3P49761 638 aaKnown RBP13.46□□□□□ -0.25
LIMS1-206ENST00000414829 PNLIPRP2P54317 469 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 CORO7P57737 925 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 FBXW4P57775 412 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 GPR85P60893 370 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 UFM1P61960 85 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 HBA1P69905 142 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 SQLEQ14534 574 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 METTL21CQ5VZV1 264 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 TMEM198Q66K66 360 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 SLC30A6Q6NXT4 461 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 GHDCQ8N2G8 530 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 COX18Q8N8Q8 333 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 OR5M3Q8NGP4 307 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 GPR151Q8TDV0 419 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 SLC9A6Q92581 669 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 RILPQ96NA2 401 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 CCDC115Q96NT0 180 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 OR52E6Q96RD3 313 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 G6PC3Q9BUM1 346 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 OSBPL11Q9BXB4 747 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 ACTRT3Q9BYD9 372 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 QPCTLQ9NXS2 382 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 SEC14L3Q9UDX4 400 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 CNOT11Q9UKZ1 510 aaKnown RBP13.46□□□□□ -0.25
LIMS1-206ENST00000414829 ABCG2Q9UNQ0 655 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 NTNG1Q9Y2I2 539 aa13.46□□□□□ -0.25
LIMS1-206ENST00000414829 CFAP46Q8IYW2 2715 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 RNF103-CHMP3A0A140T963 221 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 FAM234BA2RU67 622 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 PRAMEF25A6NGN4 478 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 NKX2-2O95096 273 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 UQCRC2P22695 453 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 MDH1P40925 334 aaKnown RBP13.45□□□□□ -0.26
LIMS1-206ENST00000414829 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
LIMS1-206ENST00000414829 CASP6P55212 293 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 KCNK10P57789 538 aa13.45□□□□□ -0.26
LIMS1-206ENST00000414829 PPIAP62937 165 aaKnown RBP13.45□□□□□ -0.26
LIMS1-206ENST00000414829 LASP1Q14847 261 aaKnown RBP13.45□□□□□ -0.26
LIMS1-206ENST00000414829 HYAL4Q2M3T9 481 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms