RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 VIPR2P41587 438 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 AVPR1BP47901 424 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 UFM1P61960 85 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 EMX2Q04743 252 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 SEC23BQ15437 767 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 BATFQ16520 125 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF674Q2M3X9 581 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 DCST1Q5T197 706 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ETFRF1Q6IPR1 90 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ATCAYQ86WG3 371 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 NUDT13Q86X67 352 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 AVL9Q8NBF6 648 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 SCAMP4Q969E2 229 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 FCRL4Q96PJ5 515 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 NENFQ9UMX5 172 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 LOC100509620A0A075B734 347 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 CPED1A4D0V7 1026 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 SAP18O00422 153 aaKnown RBP8.09□□□□□ -1.11
PBRM1-209ENST00000412587 MAFKO60675 156 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 RAB36O95755 333 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 TSPAN12O95859 305 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 WDR5P61964 334 aaKnown RBP8.09□□□□□ -1.11
PBRM1-209ENST00000412587 NTHL1P78549 312 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 DEFB103AP81534 67 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ABHD18Q0P651 414 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 SLC10A2Q12908 348 aaPredicted RBP8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ELAVL3Q14576 367 aaKnown RBP8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF273Q14593 569 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 NXNL2Q5VZ03 156 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 TMEM65Q6PI78 240 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 TMPRSS9Q7Z410 1059 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 SKA3Q8IX90 412 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ZMIZ2Q8NF64 920 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 OR52N1Q8NH53 320 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 C1orf216Q8TAB5 229 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 TRMT10AQ8TBZ6 339 aaKnown RBP8.09□□□□□ -1.11
PBRM1-209ENST00000412587 KIAA1191Q96A73 305 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 RAB7BQ96AH8 199 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 LRFN5Q96NI6 719 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ZNF300Q96RE9 604 aaPredicted RBP8.09□□□□□ -1.11
PBRM1-209ENST00000412587 ZIC5Q96T25 663 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 TMED9Q9BVK6 235 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 TMPRSS5Q9H3S3 457 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 SLC2A4RGQ9NR83 387 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 CALML5Q9NZT1 146 aa8.09□□□□□ -1.11
PBRM1-209ENST00000412587 NPIPA7E9PJI5 369 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 TMEM189-UBE2V1I3L0A0 370 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 AIPO00170 330 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 CYTIPO60759 359 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 ADAMTS4O75173 837 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 CAPNS1P04632 268 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 EDN1P05305 212 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 NPIPA8P0DM63 369 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 CKMT1AP12532 417 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 IGFALSP35858 605 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 BDKRB1P46663 353 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 CRYZQ08257 329 aaKnown RBP8.09□□□□□ -1.12
PBRM1-209ENST00000412587 DYRK1AQ13627 763 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 PTCHD3Q3KNS1 767 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 C14orf28Q4W4Y0 310 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 AGTRAPQ6RW13 159 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 TMEM200AQ86VY9 491 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 BEST3Q8N1M1 668 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.12
PBRM1-209ENST00000412587 ADAMTS19Q8TE59 1207 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 MZB1Q8WU39 189 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 SFT2D1Q8WV19 159 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 NPAS1Q99742 590 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 THAP7Q9BT49 309 aaPredicted RBP8.09□□□□□ -1.12
PBRM1-209ENST00000412587 DERL2Q9GZP9 239 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 TAC3Q9UHF0 121 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 SLC6A5Q9Y345 797 aa8.09□□□□□ -1.12
PBRM1-209ENST00000412587 OR2A25A4D2G3 310 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 TMEM150CB9EJG8 249 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 KIAA0355O15063 1070 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 SSX4O60224 188 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 ADAM11O75078 769 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 SIX6O95475 246 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 NR2C1P13056 603 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 PRPS1L1P21108 318 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 MSR1P21757 451 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 HMGCLP35914 325 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 EPHA5P54756 1037 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 CREB5Q02930 508 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 TMEM115Q12893 351 aaPredicted RBP8.08□□□□□ -1.12
PBRM1-209ENST00000412587 TNK1Q13470 666 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 AADACL4Q5VUY2 407 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 MEDAGQ5VYS4 303 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 ULK3Q6PHR2 472 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 KANSL1Q7Z3B3 1105 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 MARC2Q969Z3 335 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 KLHDC7BQ96G42 594 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 MRGPRX2Q96LB1 330 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 GAL3ST4Q96RP7 486 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 YIPF4Q9BSR8 244 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 SLIRPQ9GZT3 109 aaKnown RBP8.08□□□□□ -1.12
PBRM1-209ENST00000412587 R3HDMLQ9H3Y0 253 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 MYH14Q7Z406 1995 aaKnown RBP8.08□□□□□ -1.12
PBRM1-209ENST00000412587 C5orf51A6NDU8 294 aa8.08□□□□□ -1.12
PBRM1-209ENST00000412587 F5H5P2 479 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms