RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 NAT6Q93015 286 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 TPD52L3Q96J77 140 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 PLCXD1Q9NUJ7 323 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 FKBP14Q9NWM8 211 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 ENTPD2Q9Y5L3 495 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 IGHV1OR21-1A0A087WYE8 117 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 EFCAB10A6NFE3 127 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 SH3BP5O60239 455 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 ZNF780AO75290 641 aaPredicted RBP13.45□□□□□ -0.26
MINDY4-202ENST00000409881 LRATO95237 230 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 CLDN9O95484 217 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 LDOC1O95751 146 aaPredicted RBP13.45□□□□□ -0.26
MINDY4-202ENST00000409881 C9P02748 559 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 CKMT1AP12532 417 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 CBLP22681 906 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 PTPN6P29350 595 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 CMPK1P30085 196 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 GGT2P36268 569 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 TGM4P49221 684 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 PRDX1Q06830 199 aaKnown RBP13.45□□□□□ -0.26
MINDY4-202ENST00000409881 MAD2L1Q13257 205 aaPredicted RBP13.45□□□□□ -0.26
MINDY4-202ENST00000409881 DOC2AQ14183 400 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 ZNF79Q15937 498 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 SLCO4C1Q6ZQN7 724 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 NAXDQ8IW45 347 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 DPH2Q9BQC3 489 aaPredicted RBP13.45□□□□□ -0.26
MINDY4-202ENST00000409881 NTMT1Q9BV86 223 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 CNPPD1Q9BV87 410 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 SYNDIG1Q9H7V2 258 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 EXOSC4Q9NPD3 245 aaKnown RBP13.45□□□□□ -0.26
MINDY4-202ENST00000409881 EVA1BQ9NVM1 165 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 FTSJ1Q9UET6 329 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 SPEF1Q9Y4P9 236 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 KLK4Q9Y5K2 254 aa13.45□□□□□ -0.26
MINDY4-202ENST00000409881 A0A0B4J293 547 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 CCDC182A6NF36 153 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 PROB1E7EW31 1015 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 E9PQ18 207 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 H7BY64 318 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 CASC3O15234 703 aaKnown RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 DUX1O43812 170 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 GPX5O75715 221 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 SEMG1P04279 462 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ADRA2AP08913 450 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 EBLN1P0CF75 366 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 TRAPPC2P0DI81 140 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 TRAPPC2BP0DI82 140 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 HOXB6P17509 224 aaKnown RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 RPS5P46782 204 aaKnown RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 DUSP3P51452 185 aaPredicted RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 SNRPD2P62316 118 aaKnown RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 MEF2AQ02078 507 aaPredicted RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 HYAL2Q12891 473 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 MADCAM1Q13477 382 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 EFR3AQ14156 821 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 CPSF6Q16630 551 aaKnown RBP eCLIP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 NXPE4Q6UWF7 544 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 VANGL1Q8TAA9 524 aaPredicted RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 FLVCR1-AS1Q8TAF5 88 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 IFI44Q8TCB0 444 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 RNF31Q96EP0 1072 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 PRAP1Q96NZ9 151 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 TSSK3Q96PN8 268 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 CCDC3Q9BQI4 270 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 BARHL1Q9BZE3 327 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 SLC6A20Q9NP91 592 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 DLGAP4Q9Y2H0 992 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ULK1O75385 1050 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 KDELR2P33947 212 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 RPS19P39019 145 aaKnown RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ITGA1P56199 1179 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ABATP80404 500 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 PAMR1Q6UXH9 720 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 TMPRSS11AQ6ZMR5 421 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 USP53Q70EK8 1073 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ASCL5Q7RTU5 278 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ZNF605Q86T29 641 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 UTP15Q8TED0 518 aaKnown RBP13.44□□□□□ -0.26
MINDY4-202ENST00000409881 TGM7Q96PF1 710 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 DPH7Q9BTV6 452 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 GON7Q9BXV9 100 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 GABARAPL3Q9BY60 117 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ABCG4Q9H172 646 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 PRM3Q9NNZ6 103 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 TMEM184CQ9NVA4 438 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ZNF226Q9NYT6 803 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 POMT2Q9UKY4 750 aa13.44□□□□□ -0.26
MINDY4-202ENST00000409881 ASCC3Q8N3C0 2202 aaKnown RBP13.43□□□□□ -0.26
MINDY4-202ENST00000409881 SLC28A1O00337 649 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 RFXANKO14593 260 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 AKR7A2O43488 359 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 FHP07954 510 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 C1GALT1C1LP0DN25 315 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 PVRP15151 417 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 PNLIPP16233 465 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 CD22P20273 847 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 MYL9P24844 172 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 CCR8P51685 355 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 GFERP55789 205 aa13.43□□□□□ -0.26
MINDY4-202ENST00000409881 OLR1P78380 273 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms