RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 OR2A14Q96R47 310 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 OR7D2Q96RA2 312 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 SRA1Q9HD15 236 aaKnown RBP10.69□□□□□ -0.7
SNX13-202ENST00000409604 MYNNQ9NPC7 610 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 ZSCAN32Q9NX65 697 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 SRPK3Q9UPE1 567 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 TSPAN11A1L157 253 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 PRAMEF4O60810 478 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 ATP4BP51164 291 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 CLCN2P51788 898 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 ZNF41P51814 821 aaPredicted RBP10.69□□□□□ -0.7
SNX13-202ENST00000409604 MAPK11Q15759 364 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 PRAMEF9Q5VWM5 478 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 LSRQ86X29 649 aaPredicted RBP10.69□□□□□ -0.7
SNX13-202ENST00000409604 TMEM151AQ8N4L1 468 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 FAM86B1Q8N7N1 296 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 KLHL6Q8WZ60 621 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 CCNL2Q96S94 520 aaPredicted RBP10.69□□□□□ -0.7
SNX13-202ENST00000409604 TREX2Q9BQ50 279 aaPredicted RBP10.69□□□□□ -0.7
SNX13-202ENST00000409604 OSBPL11Q9BXB4 747 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 C1orf21Q9H246 121 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 DAPP1Q9UN19 280 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 ERGIC3Q9Y282 383 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 AP1M2Q9Y6Q5 423 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 RIIAD1A6NNX1 92 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 EFEMP2O95967 443 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 GM2AP17900 193 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 NUP54Q7Z3B4 507 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 TRIM46Q7Z4K8 759 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 NANOGNBQ7Z5D8 188 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 OAFQ86UD1 273 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 CADM4Q8NFZ8 388 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 OR5M1Q8NGP8 315 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 DUSP19Q8WTR2 217 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 TOR3AQ9H497 397 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 EPB41L1Q9H4G0 881 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 MED31Q9Y3C7 131 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 LOXL2Q9Y4K0 774 aa10.69□□□□□ -0.7
SNX13-202ENST00000409604 DCDC2BA2VCK2 349 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 SOCS2O14508 198 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 CPNE3O75131 537 aaKnown RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 POLR2IP36954 125 aaKnown RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 DPP6P42658 865 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 ST3GAL3Q11203 375 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 EIPR1Q53HC9 387 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 ALG10BQ5I7T1 473 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 C10orf62Q5T681 223 aaPredicted RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 DDI2Q5TDH0 399 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 Q6ZPB1 254 aaPredicted RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 SHFQ7M4L6 423 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 NRMQ8IXM6 262 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 CHTF18Q8WVB6 975 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 FAM46AQ96IP4 442 aaKnown RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 PCDHA9Q9Y5H5 950 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 IGHV1OR21-1A0A087WYE8 117 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 ASNA1O43681 348 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 FCMRO60667 390 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 GIMD1P0DJR0 217 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 EPHA8P29322 1005 aaPredicted RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 TNFRSF17Q02223 184 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 RUNDC3AQ59EK9 446 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 B3GLCTQ6Y288 498 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 ABI3BPQ7Z7G0 1075 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 RBM45Q8IUH3 476 aaKnown RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 ZNF433Q8N7K0 673 aaPredicted RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 AMDHD1Q96NU7 426 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 PTGES2Q9H7Z7 377 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 BTNL2Q9UIR0 455 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 RNF13O43567 381 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 PRAMEF2O60811 474 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 AHSA1O95433 338 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 DNAJA1P31689 397 aaKnown RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 ARG2P78540 354 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 TRAP1Q12931 704 aaKnown RBP10.68□□□□□ -0.7
SNX13-202ENST00000409604 LANCL3Q6ZV70 420 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 UTS2BQ765I0 119 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 P4HA3Q7Z4N8 544 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 THAP5Q7Z6K1 395 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 CLEC1AQ8NC01 280 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 OR6N1Q8NGY5 312 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 OR5K1Q8NHB7 308 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 OR14L1PQ8NHC6 308 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 SLC38A5Q8WUX1 472 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 TANKQ92844 425 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 SLC29A1Q99808 456 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 SDHAF3Q9NRP4 125 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 SLC6A13Q9NSD5 602 aa10.68□□□□□ -0.7
SNX13-202ENST00000409604 INTS1Q8N201 2190 aaKnown RBP10.67□□□□□ -0.7
SNX13-202ENST00000409604 SH3D21A4FU49 640 aa10.67□□□□□ -0.7
SNX13-202ENST00000409604 PSMD9O00233 223 aa10.67□□□□□ -0.7
SNX13-202ENST00000409604 MEN1O00255 615 aa10.67□□□□□ -0.7
SNX13-202ENST00000409604 FOXE1O00358 373 aaPredicted RBP10.67□□□□□ -0.7
SNX13-202ENST00000409604 CSO75390 466 aaKnown RBP10.67□□□□□ -0.7
SNX13-202ENST00000409604 GPLD1P80108 840 aa10.67□□□□□ -0.7
SNX13-202ENST00000409604 RBM44Q6ZP01 1051 aaKnown RBP10.67□□□□□ -0.7
SNX13-202ENST00000409604 ERMP1Q7Z2K6 904 aa10.67□□□□□ -0.7
SNX13-202ENST00000409604 BMP8AQ7Z5Y6 402 aa10.67□□□□□ -0.7
SNX13-202ENST00000409604 CNIH3Q8TBE1 160 aa10.67□□□□□ -0.7
SNX13-202ENST00000409604 MUS81Q96NY9 551 aa10.67□□□□□ -0.7
SNX13-202ENST00000409604 MS4A4EQ96PG1 132 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms