RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 OR5B2Q96R09 309 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 RANBP9Q96S59 729 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 SLC30A2Q9BRI3 323 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 DOHHQ9BU89 302 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 NANSQ9NR45 359 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ICKQ9UPZ9 632 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 USP3Q9Y6I4 520 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ANHXE9PGG2 379 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 MAS1P04201 325 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 MVKQ03426 396 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 OR4D1Q15615 310 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 NANOS1Q8WY41 292 aaKnown RBP13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 SECISBP2Q96T21 854 aaKnown RBP13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ZFYVE21Q9BQ24 234 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 RXFP3Q9NSD7 469 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ACTR10Q9NZ32 417 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 IL20RAQ9UHF4 553 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 VDAC3Q9Y277 283 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 MPPED1O15442 326 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 ANXA3P12429 323 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 UNC50Q53HI1 259 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 PLEKHG7Q6ZR37 379 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 OR52E2Q8NGJ4 325 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 TMEM168Q9H0V1 697 aa13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 COLQQ9Y215 455 aaPredicted RBP13.51□□□□□ -0.25
PCDHA11-201ENST00000398640 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 CDC14CA4D256 554 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 H0YJX3 145 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 NPPAP01160 153 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 BMP1P13497 986 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 GCGRP47871 477 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 HK3P52790 923 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 GSCP56915 257 aaPredicted RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 HSD11B2P80365 405 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 CDNFQ49AH0 187 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 FCRLBQ6BAA4 426 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 TMPRSS12Q86WS5 348 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF584Q8IVC4 421 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 SLC5A8Q8N695 610 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 PSD4Q8NDX1 1056 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF431Q8TF32 576 aaPredicted RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 PEX13Q92968 403 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 SGTBQ96EQ0 304 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 LRIT1Q9P2V4 623 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 EXTL2Q9UBQ6 330 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 GJE1A6NN92 205 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 FAAHO00519 579 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 BCAS2O75934 225 aaPredicted RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 HLA-FP30511 346 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 UBE2UQ5VVX9 321 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 AKAP1Q92667 903 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 NECAB3Q96P71 396 aaPredicted RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF442Q9H7R0 627 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 PRSS16Q9NQE7 514 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 KIR2DS5A0A0G2JLQ3 304 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 A0A0G2JNG1 304 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 PRSS38A1L453 326 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 LRRN3E7EW58 273 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 KIR2DS3K7RE56 304 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 SMAD6O43541 496 aaKnown RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 KIR2DS5Q14953 304 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 UNC5DQ6UXZ4 953 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 CENPSQ8N2Z9 138 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 OR6Q1Q8NGQ2 317 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 TBC1D15Q8TC07 691 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 LRRN3Q9H3W5 708 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 MRPL15Q9P015 296 aaKnown RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 SLC9B1P1A6NJY1 282 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 C17orf105B2RV13 164 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 DCKP27707 260 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 BDH1Q02338 343 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 NFATC4Q14934 902 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 TMEM201Q5SNT2 666 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 LIPIQ6XZB0 460 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 ZNF765Q7L2R6 523 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 PNPLA1Q8N8W4 532 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 NEIL3Q8TAT5 605 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 CHFRQ96EP1 664 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 FAM46AQ96IP4 442 aaKnown RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 PRRX2Q99811 253 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 RBM24Q9BX46 236 aaKnown RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 HINT2Q9BX68 163 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 SPEF1Q9Y4P9 236 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 A0A0A6YYC8 382 aaPredicted RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 I3L1I5 382 aaPredicted RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 TIMP2P16035 220 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 RUNDC3AQ59EK9 446 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 PNCKQ6P2M8 343 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 GRPEL2Q8TAA5 225 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 RDH12Q96NR8 316 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 ALOXE3Q9BYJ1 711 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 MYEF2Q9P2K5 600 aaKnown RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 YARS2Q9Y2Z4 477 aaKnown RBP13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 LRRC42Q9Y546 428 aa13.5□□□□□ -0.25
PCDHA11-201ENST00000398640 AQP9O43315 295 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 IFNA7P01567 189 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 GLULP15104 373 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 NIPAL4Q0D2K0 466 aa13.49□□□□□ -0.25
PCDHA11-201ENST00000398640 MPP2Q14168 576 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms