RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 CDCA4Q9BXL8 241 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 ZSCAN32Q9NX65 697 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 LGI1O95970 557 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 ACSL1P33121 698 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 SOX3P41225 446 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 MLLT1Q03111 559 aaPredicted RBP22.31■■□□□ 1.16
PABPN1-202ENST00000397276 CLPPQ16740 277 aaPredicted RBP22.31■■□□□ 1.16
PABPN1-202ENST00000397276 BHLHB9Q6PI77 547 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 SHISA5Q8N114 240 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 BBS10Q8TAM1 723 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 SRMSQ9H3Y6 488 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 SLC25A19Q9HC21 320 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 CNOT2Q9NZN8 540 aaKnown RBP22.31■■□□□ 1.16
PABPN1-202ENST00000397276 GPR55Q9Y2T6 319 aaPredicted RBP22.31■■□□□ 1.16
PABPN1-202ENST00000397276 ZNF780BQ9Y6R6 833 aa22.31■■□□□ 1.16
PABPN1-202ENST00000397276 ARHGAP33O14559 1287 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 PRKYO43930 277 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 DNAJB6O75190 326 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 APOA1P02647 267 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 TP53P04637 393 aaPredicted RBP22.3■■□□□ 1.16
PABPN1-202ENST00000397276 SMIM11AP58511 58 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 MRPS15P82914 257 aaKnown RBP22.3■■□□□ 1.16
PABPN1-202ENST00000397276 ZNF311Q5JNZ3 666 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 ZNF425Q6IV72 752 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 PAQR6Q6TCH4 344 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 VN1R4Q7Z5H5 301 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 KBTBD8Q8NFY9 601 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 OR10G6Q8NH81 332 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 ELP4Q96EB1 424 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 FUZQ9BT04 418 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 SNX7Q9UNH6 387 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 A0A1W2PRQ8 180 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 RASGRP1O95267 797 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 PTNP21246 168 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 AZGP1P25311 298 aaKnown RBP22.3■■□□□ 1.16
PABPN1-202ENST00000397276 TGM4P49221 684 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 LIMK1P53667 647 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 STXBP1P61764 594 aaKnown RBP22.3■■□□□ 1.16
PABPN1-202ENST00000397276 PRR5P85299 388 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 KIAA1324Q6UXG2 1013 aaKnown RBP22.3■■□□□ 1.16
PABPN1-202ENST00000397276 ZNF367Q7RTV3 350 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 UBQLNLQ8IYU4 475 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 SPATA5L1Q9BVQ7 753 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 EXOSC4Q9NPD3 245 aaKnown RBP22.3■■□□□ 1.16
PABPN1-202ENST00000397276 MUTYHQ9UIF7 546 aa22.3■■□□□ 1.16
PABPN1-202ENST00000397276 FCMRO60667 390 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 SLC15A1P46059 708 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 OLR1P78380 273 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 GINS1Q14691 196 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 ACSM5Q6NUN0 579 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 CCDC190Q86UF4 302 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 CDCA3Q99618 268 aaPredicted RBP22.29■■□□□ 1.16
PABPN1-202ENST00000397276 TSSK6Q9BXA6 273 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 KIR3DX1Q9H7L2 352 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 GIMAP4Q9NUV9 329 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 PEX16Q9Y5Y5 336 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 CPSF4LA6NMK7 179 aaKnown RBP22.29■■□□□ 1.16
PABPN1-202ENST00000397276 TFECO14948 347 aaPredicted RBP22.29■■□□□ 1.16
PABPN1-202ENST00000397276 APOL3O95236 402 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 AVPR1BP47901 424 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 DEFA1P59665 94 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 DEFA3P59666 94 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 TMEM64Q6YI46 380 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 TMEFF1Q8IYR6 380 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 SRFBP1Q8NEF9 429 aaKnown RBP22.29■■□□□ 1.16
PABPN1-202ENST00000397276 ST6GAL2Q96JF0 529 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 SLC6A18Q96N87 628 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 OR2B2Q9GZK3 357 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 EGLN3Q9H6Z9 239 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 SLC28A3Q9HAS3 691 aa22.29■■□□□ 1.16
PABPN1-202ENST00000397276 CCDC59Q9P031 241 aaKnown RBP22.29■■□□□ 1.16
PABPN1-202ENST00000397276 EMC8O43402 210 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 MAN2A2P49641 1150 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 SSX1Q16384 188 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 FAM214AQ32MH5 1076 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 DEFB134Q4QY38 66 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 C12orf73Q69YU5 71 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 OR56A1Q8NGH5 318 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 C9orf43Q8TAL5 461 aaPredicted RBP22.28■■□□□ 1.16
PABPN1-202ENST00000397276 KLHL6Q8WZ60 621 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 OR2A14Q96R47 310 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 GABRG3Q99928 467 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 BCL2L10Q9HD36 194 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 NTNG1Q9Y2I2 539 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 A3GALT2U3KPV4 340 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 WWP2O00308 870 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 RGS5O15539 181 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 KCNJ13O60928 360 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 TNFSF8P32971 234 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 TAS2R41P59536 307 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 SNRPGP62308 76 aaKnown RBP22.28■■□□□ 1.16
PABPN1-202ENST00000397276 ZNF91Q05481 1191 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 TGM3Q08188 693 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 MAP4K2Q12851 820 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 MADCAM1Q13477 382 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 ASCC1Q8N9N2 400 aaKnown RBP22.28■■□□□ 1.16
PABPN1-202ENST00000397276 ZNF681Q96N22 645 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 SLC38A1Q9H2H9 487 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 OR6C2Q9NZP2 312 aa22.28■■□□□ 1.16
PABPN1-202ENST00000397276 MKLN1Q9UL63 735 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms