RNA–Protein interactions for RNA: ENST00000394943.7

LIMA1-202, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-202ENST00000394943 OR2W5A6NFC9 320 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 ALG1L2C9J202 215 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 GCM2O75603 506 aaPredicted RBP6.46□□□□□ -1.38
LIMA1-202ENST00000394943 SEC24DO94855 1032 aaPredicted RBP6.46□□□□□ -1.38
LIMA1-202ENST00000394943 KCNH1O95259 989 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 SSTR4P31391 388 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 OTX2P32243 289 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 PCGF2P35227 344 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 KHKP50053 298 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 MANFP55145 182 aaKnown RBP6.46□□□□□ -1.38
LIMA1-202ENST00000394943 EEFSECP57772 596 aaKnown RBP6.46□□□□□ -1.38
LIMA1-202ENST00000394943 BNIP1Q12981 228 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 ATP1A1-AS1Q5TC04 95 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 FOXR1Q6PIV2 292 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 SLC29A4Q7RTT9 530 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 C6orf120Q7Z4R8 191 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 OR4N5Q8IXE1 308 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 ZFP62Q8NB50 900 aaPredicted RBP6.46□□□□□ -1.38
LIMA1-202ENST00000394943 SIMC1Q8NDZ2 872 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 NUDT8Q8WV74 236 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 PPWD1Q96BP3 646 aaKnown RBP6.46□□□□□ -1.38
LIMA1-202ENST00000394943 OR7D2Q96RA2 312 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 BBS4Q96RK4 519 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 ITPAQ9BY32 194 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 MUC13Q9H3R2 512 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 VAPAQ9P0L0 249 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 TAGLN3Q9UI15 199 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 FIS1Q9Y3D6 152 aa6.46□□□□□ -1.38
LIMA1-202ENST00000394943 GPC6Q9Y625 555 aaPredicted RBP6.46□□□□□ -1.38
LIMA1-202ENST00000394943 EP300Q09472 2414 aaPredicted RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CLEC18AA5D8T8 446 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 GLOD5A6NK44 160 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 MAN1A2O60476 641 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 DPM1O60762 260 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 KCNK2O95069 426 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CELA2AP08217 269 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ETS2P15036 469 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CNR1P21554 472 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 SLC6A2P23975 617 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ABCD3P28288 659 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CYLC2Q14093 348 aaPredicted RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 MAPKAPK3Q16644 382 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 VPS26BQ4G0F5 336 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 FAM69BQ5VUD6 431 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ANKRD26P1Q6NSI1 321 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 PGM2L1Q6PCE3 622 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 TMEM107Q6UX40 140 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CLEC18BQ6UXF7 455 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 Q6ZPB1 254 aaPredicted RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 MTDHQ86UE4 582 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 RPS19BP1Q86WX3 136 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 TAGAPQ8N103 731 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 KIF2BQ8N4N8 673 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 BCORP1Q8N888 145 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CLEC18CQ8NCF0 446 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 OR4A15Q8NGL6 344 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 LRRC58Q96CX6 371 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 DUS3LQ96G46 650 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 RSPO3Q9BXY4 272 aaPredicted RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 PCDHAC1Q9H158 963 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ZDHHC11Q9H8X9 412 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ABI3Q9P2A4 366 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 DCTN4Q9UJW0 460 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CAPN7Q9Y6W3 813 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 SPENQ96T58 3664 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ASPMQ8IZT6 3477 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 B4DXG7 233 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ERAL1O75616 437 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 SSR4P51571 173 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 TDGF1P3P51864 188 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 DGKQP52824 942 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 PSMD4P55036 377 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 RPP38P78345 283 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 UBAP2LQ14157 1087 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 DUSP5Q16690 384 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 TYW3Q6IPR3 259 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 FRRS1Q6ZNA5 592 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 GK5Q6ZS86 529 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ASRGL1Q7L266 308 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ZZZ3Q8IYH5 903 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 PGAM4Q8N0Y7 254 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CLHC1Q8NHS4 586 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 REXO5Q96IC2 774 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 THOC3Q96J01 351 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 SDF2Q99470 211 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 G6PC3Q9BUM1 346 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 RBCK1Q9BYM8 510 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 OR2B2Q9GZK3 357 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 NXF5Q9H1B4 397 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 C12orf10Q9HB07 376 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 PNO1Q9NRX1 252 aaKnown RBP6.45□□□□□ -1.38
LIMA1-202ENST00000394943 NDE1Q9NXR1 346 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 GPR83Q9NYM4 423 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 CBLCQ9ULV8 474 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 ZNF835Q9Y2P0 537 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 NPFFR2Q9Y5X5 522 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 FRYQ5TBA9 3013 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 A0A0G2JPF8 293 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 HNRNPCL2B2RXH8 293 aa6.45□□□□□ -1.38
LIMA1-202ENST00000394943 HNRNPCL3B7ZW38 293 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms