RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 PLSCR5A0PG75 271 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 HEPACAM2A8MVW5 462 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 H7C2Y5 167 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 LRATO95237 230 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 TFPIP10646 304 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 AMD1P17707 334 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 AKR1D1P51857 326 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.79■□□□□ 0.44
HOXC6-202ENST00000394331 FIBINQ8TAL6 211 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 HIST1H2AHQ96KK5 128 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 OR4K3Q96R72 315 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 RNF32Q9H0A6 362 aa17.79■□□□□ 0.44
HOXC6-202ENST00000394331 MRPL17Q9NRX2 175 aaKnown RBP17.79■□□□□ 0.44
HOXC6-202ENST00000394331 ZNF821O75541 412 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-202ENST00000394331 AQP1P29972 269 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 CCL23P55773 120 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 TSPAN5P62079 268 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 ASB18Q6ZVZ8 466 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 BTN2A1Q7KYR7 527 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 MOSPD2Q8NHP6 518 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 SLC22A8Q8TCC7 542 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 MTFMTQ96DP5 389 aaKnown RBP17.78■□□□□ 0.44
HOXC6-202ENST00000394331 SPATA5L1Q9BVQ7 753 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 IMP3Q9NV31 184 aaKnown RBP17.78■□□□□ 0.44
HOXC6-202ENST00000394331 HNRNPCL2B2RXH8 293 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 GNRH1P01148 92 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 URODP06132 367 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 C8GP07360 202 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 HIST1H2AGP0C0S8 130 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-202ENST00000394331 TNFRSF1BP20333 461 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 HIST1H2ADP20671 130 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 RAB13P51153 203 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 UBE2R2Q712K3 238 aaPredicted RBP17.78■□□□□ 0.44
HOXC6-202ENST00000394331 KCTD12Q96CX2 325 aaKnown RBP17.78■□□□□ 0.44
HOXC6-202ENST00000394331 ZNF558Q96NG5 402 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 HIST1H2AJQ99878 128 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 SLC12A9Q9BXP2 914 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 POLDIP3Q9BY77 421 aaKnown RBP17.78■□□□□ 0.44
HOXC6-202ENST00000394331 EPHA6Q9UF33 1036 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 MGAT4BQ9UQ53 548 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 LOC105369274A0A096LPK9 316 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 CXorf51AA0A1B0GTR3 108 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 PQBP1O60828 265 aaKnown RBP17.78■□□□□ 0.44
HOXC6-202ENST00000394331 EPORP19235 508 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 ZDHHC20Q5W0Z9 365 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 NOXRED1Q6NXP6 359 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 ATRAIDQ6UW56 229 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 SHFQ7M4L6 423 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 OR4N4Q8N0Y3 316 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 HUS1BQ8NHY5 278 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 NXPE3Q969Y0 559 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 OSGEPL1Q9H4B0 414 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 PPIL1Q9Y3C6 166 aa17.78■□□□□ 0.44
HOXC6-202ENST00000394331 GABRR3A8MPY1 467 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 CPSF4O95639 269 aaKnown RBP17.77■□□□□ 0.44
HOXC6-202ENST00000394331 PLATP00750 562 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 HLA-DPB1P04440 258 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 CCR7P32248 378 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 OR1E2P47887 323 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 PITPNBP48739 271 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 HNMTP50135 292 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 SLC36A2Q495M3 483 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 TCTE1Q5JU00 501 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 DEFB128Q7Z7B8 93 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 OR56B4Q8NH76 319 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 NSMAFQ92636 917 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 MRPS31Q92665 395 aaKnown RBP17.77■□□□□ 0.44
HOXC6-202ENST00000394331 MAL2Q969L2 176 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 SLC38A3Q99624 504 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 MAFFQ9ULX9 164 aa17.77■□□□□ 0.44
HOXC6-202ENST00000394331 KCNE1BA0A087WTH5 132 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 D6RAR5 112 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 LGALS8O00214 317 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 CKMP06732 381 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 GAS1P54826 345 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 LRRC74AQ0VAA2 488 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 CRB2Q5IJ48 1285 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 OAFQ86UD1 273 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 CLECL1Q8IZS7 167 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 SLC39A11Q8N1S5 342 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 TCF25Q9BQ70 676 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 ARHGAP9Q9BRR9 750 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 PITHD1Q9GZP4 211 aaPredicted RBP17.77■□□□□ 0.43
HOXC6-202ENST00000394331 SUV39H2Q9H5I1 410 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 ESRP2Q9H6T0 727 aaKnown RBP17.77■□□□□ 0.43
HOXC6-202ENST00000394331 BIN3Q9NQY0 253 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 CFAP97Q9P2B7 532 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 CTSFQ9UBX1 484 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 PRKAG2Q9UGJ0 569 aa17.77■□□□□ 0.43
HOXC6-202ENST00000394331 EXOSC1Q9Y3B2 195 aaKnown RBP17.77■□□□□ 0.43
HOXC6-202ENST00000394331 ANKDD1BA6NHY2 528 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 KPNA3O00505 521 aaPredicted RBP17.76■□□□□ 0.43
HOXC6-202ENST00000394331 SSNA1O43805 119 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 IFNA4P05014 189 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 COX7A2P14406 83 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 CD70P32970 193 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 KCNJ5P48544 419 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 RAB40BQ12829 278 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 SPDYE7PQ495Y7 208 aa17.76■□□□□ 0.43
HOXC6-202ENST00000394331 ATP13A5Q4VNC0 1218 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms