RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 ASCC3Q8N3C0 2202 aaKnown RBP8.05□□□□□ -1.12
TDP1-203ENST00000393454 KMT2EQ8IZD2 1858 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 WDFY4Q6ZS81 3184 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 MYO15AQ9UKN7 3530 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 LNP1A1A4G5 178 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 C17orf105B2RV13 164 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 D6RAR5 112 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 M0R3H8 397 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 LYNP07948 512 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 IFI6P09912 130 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 PABPC4LP0CB38 370 aaKnown RBP8.05□□□□□ -1.12
TDP1-203ENST00000393454 ZNF883P0CG24 379 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 RHCEP18577 417 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 S1PR1P21453 382 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 CAPGP40121 348 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 GCGRP47871 477 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 CHN2P52757 468 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 POU6F2P78424 691 aaPredicted RBP8.05□□□□□ -1.12
TDP1-203ENST00000393454 PPP2R2BQ00005 443 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 BIKQ13323 160 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 GPR68Q15743 365 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 CLPPQ16740 277 aaPredicted RBP8.05□□□□□ -1.12
TDP1-203ENST00000393454 DCST2Q5T1A1 773 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 FIGNL1Q6PIW4 674 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 VRK2Q86Y07 508 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 RBM45Q8IUH3 476 aaKnown RBP8.05□□□□□ -1.12
TDP1-203ENST00000393454 ATG16L2Q8NAA4 619 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 ZNF555Q8NEP9 628 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 OR52P1PQ8NH57 321 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 TSLPQ969D9 159 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 ZG16BQ96DA0 208 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 NRBF2Q96F24 287 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 FBXL20Q96IG2 436 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 STACQ99469 402 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 SDF2Q99470 211 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 PINK1Q9BXM7 581 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 TOR3AQ9H497 397 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 MTHFD2LQ9H903 347 aaPredicted RBP8.05□□□□□ -1.12
TDP1-203ENST00000393454 FOLH1BQ9HBA9 442 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 MKKSQ9NPJ1 570 aaPredicted RBP8.05□□□□□ -1.12
TDP1-203ENST00000393454 OCIAD1Q9NX40 245 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 USE1Q9NZ43 259 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 ZNF232Q9UNY5 417 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 SLC9A8Q9Y2E8 581 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 PCDHGB5Q9Y5G0 923 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 CLDN16Q9Y5I7 305 aa8.05□□□□□ -1.12
TDP1-203ENST00000393454 GXYLT2A0PJZ3 443 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 EFCAB7A8K855 629 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 FLRT2O43155 660 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 DYRK3O43781 588 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 DPM1O60762 260 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 PRAMEF2O60811 474 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 STX11O75558 287 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 DNAJB5O75953 348 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 SEC24DO94855 1032 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 GADD45GO95257 159 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 TIAF1O95411 115 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 CLIC3O95833 236 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 RECKO95980 971 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 GNAO1P09471 354 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 IGFBP5P24593 272 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 RAD23AP54725 363 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 DUSP8Q13202 625 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 SF3A2Q15428 464 aaKnown RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 NSDHLQ15738 373 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 EXOC3L2Q2M3D2 409 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 SLC36A3Q495N2 470 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 PLA2G2CQ5R387 149 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 LAIR1Q6GTX8 287 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 TYW3Q6IPR3 259 aaKnown RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 RHBDD2Q6NTF9 364 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 PWWP2BQ6NUJ5 590 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 TMEM154Q6P9G4 183 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 UGT2A3Q6UWM9 527 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 FRRS1Q6ZNA5 592 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 QSOX2Q6ZRP7 698 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 SHISA6Q6ZSJ9 500 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 B3GNT8Q7Z7M8 397 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 GALNT5Q7Z7M9 940 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 PPP1R3BQ86XI6 285 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 LACC1Q8IV20 430 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 SLITRK4Q8IW52 837 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 TMEM151BQ8IW70 566 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 CHERPQ8IWX8 916 aaKnown RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 PEX5LQ8IYB4 626 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 TAGAPQ8N103 731 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 OR4D11Q8NGI4 311 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 GIPC3Q8TF64 312 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 PHF10Q8WUB8 498 aaKnown RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 GATA6Q92908 595 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 RMND5BQ96G75 393 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 CTRCQ99895 268 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 RSPO3Q9BXY4 272 aaPredicted RBP8.04□□□□□ -1.12
TDP1-203ENST00000393454 GABARAPL1Q9H0R8 117 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 APMAPQ9HDC9 416 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 DUSP22Q9NRW4 184 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 SCOCQ9UIL1 159 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 MKL2Q9ULH7 1088 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 PCDHGB2Q9Y5G2 931 aa8.04□□□□□ -1.12
TDP1-203ENST00000393454 HEMK1Q9Y5R4 338 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms