RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 KDM4DQ6B0I6 523 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 LAIR1Q6GTX8 287 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 LAIR2Q6ISS4 152 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 WDR5BQ86VZ2 330 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 PRSS58Q8IYP2 241 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 OR2L13Q8N349 312 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 OR4C15Q8NGM1 316 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 OR1L3Q8NH93 324 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 GEMIN6Q8WXD5 167 aaKnown RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 COG8Q96MW5 612 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 NPLQ9BXD5 320 aaPredicted RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 GAREM1Q9H706 876 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 SYNDIG1Q9H7V2 258 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 MS4A12Q9NXJ0 267 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 USE1Q9NZ43 259 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 MAT2BQ9NZL9 334 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 NDOR1Q9UHB4 597 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 SLC6A14Q9UN76 642 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 PLCL2Q9UPR0 1127 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 DTX4Q9Y2E6 619 aa13.98□□□□□ -0.17
MKS1-202ENST00000393119 GPC6Q9Y625 555 aaPredicted RBP13.98□□□□□ -0.17
MKS1-202ENST00000393119 LOC100130705A0A1B0GUX0 176 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 HTR3EA5X5Y0 456 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 M0R129 80 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 SULT1C4O75897 302 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 EPHA8P29322 1005 aaPredicted RBP13.97□□□□□ -0.17
MKS1-202ENST00000393119 SSTR4P31391 388 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 ARRB1P49407 418 aaPredicted RBP13.97□□□□□ -0.17
MKS1-202ENST00000393119 PSMD7P51665 324 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 SEC23BQ15437 767 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 NNATQ16517 81 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 FIGNL1Q6PIW4 674 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 KANSL1Q7Z3B3 1105 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 ZAR1Q86SH2 424 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 OR4N2Q8NGD1 307 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 OR6T1Q8NGN1 323 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 CNIH3Q8TBE1 160 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 SFXN5Q8TD22 340 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 ADAMTS15Q8TE58 950 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 ZDHHC12Q96GR4 267 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 ACTRT3Q9BYD9 372 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 GIN1Q9NXP7 522 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 ADAMTS9Q9P2N4 1935 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 GXYLT2A0PJZ3 443 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 H3BMH7 237 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 SRPX2O60687 465 aaPredicted RBP13.97□□□□□ -0.17
MKS1-202ENST00000393119 IGFBP1P08833 259 aaPredicted RBP13.97□□□□□ -0.17
MKS1-202ENST00000393119 MANEAQ5SRI9 462 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 CCDC71Q8IV32 467 aaPredicted RBP13.97□□□□□ -0.17
MKS1-202ENST00000393119 CENPSQ8N2Z9 138 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 CLIP4Q8N3C7 705 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 EID2Q8N6I1 236 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 SAP25Q8TEE9 199 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 GTPBP3Q969Y2 492 aaKnown RBP13.97□□□□□ -0.17
MKS1-202ENST00000393119 MESP1Q9BRJ9 268 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 RHNO1Q9BSD3 238 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 ENPP4Q9Y6X5 453 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 SEC16AO15027 2179 aa13.97□□□□□ -0.17
MKS1-202ENST00000393119 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.96□□□□□ -0.17
MKS1-202ENST00000393119 A8MVJ9 347 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 IFNW1P05000 195 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 GNSP15586 552 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 CRISP3P54108 245 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 TCEAL6Q6IPX3 200 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 ZNF605Q86T29 641 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 PROX1Q92786 737 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 TCEAL3Q969E4 200 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 PIP5K1AQ99755 562 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 ERVMER34-1Q9H9K5 563 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 KIF17Q9P2E2 1029 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 IFT80Q9P2H3 777 aaPredicted RBP13.96□□□□□ -0.17
MKS1-202ENST00000393119 PCDHGB3Q9Y5G1 929 aa13.96□□□□□ -0.17
MKS1-202ENST00000393119 A0A1W2PQM1 296 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 BCAS1O75363 584 aaPredicted RBP13.96□□□□□ -0.18
MKS1-202ENST00000393119 OR2B3O76000 313 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 CBX7O95931 251 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 HPRP00739 348 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 ATP1B1P05026 303 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 TTKP33981 857 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 CD47Q08722 323 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 GPR68Q15743 365 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 NPTX1Q15818 432 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 MAPK14Q16539 360 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 NIPAL1Q6NVV3 410 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 MAMSTRQ6ZN01 415 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 C16orf62Q7Z3J2 963 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 LGI4Q8N135 537 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 PIK3C3Q8NEB9 887 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 OR10G2Q8NGC3 310 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 OR52R1Q8NGF1 315 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 OR51Q1Q8NH59 317 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 ATOH1Q92858 354 aaPredicted RBP13.96□□□□□ -0.18
MKS1-202ENST00000393119 CNDP2Q96KP4 475 aaKnown RBP13.96□□□□□ -0.18
MKS1-202ENST00000393119 ZNF354BQ96LW1 612 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 ZNF285Q96NJ3 590 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 DCUN1D5Q9BTE7 237 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 ALOXE3Q9BYJ1 711 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 NMNAT1Q9HAN9 279 aaPredicted RBP13.96□□□□□ -0.18
MKS1-202ENST00000393119 NECTIN3Q9NQS3 549 aa13.96□□□□□ -0.18
MKS1-202ENST00000393119 THSD1Q9NS62 852 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms