RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 EXOSC3Q9NQT5 275 aaKnown RBP0.17□□□□□ -2.38
SNORD28-201ENST00000384706 NANSQ9NR45 359 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 ABCB8Q9NUT2 735 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 RBAKQ9NYW8 714 aaPredicted RBP0.17□□□□□ -2.38
SNORD28-201ENST00000384706 BCCIPQ9P287 314 aaKnown RBP eCLIP0.17□□□□□ -2.38
SNORD28-201ENST00000384706 WDR35Q9P2L0 1181 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 ONECUT1Q9UBC0 465 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 TRPC4Q9UBN4 977 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 TUBGCP4Q9UGJ1 667 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 ARMCX3Q9UH62 379 aaPredicted RBP0.17□□□□□ -2.38
SNORD28-201ENST00000384706 OPN4Q9UHM6 478 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 TRMT6Q9UJA5 497 aaKnown RBP0.17□□□□□ -2.38
SNORD28-201ENST00000384706 EMCNQ9ULC0 261 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 IFT52Q9Y366 437 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 ATG4BQ9Y4P1 393 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 SNX8Q9Y5X2 465 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 TEX264Q9Y6I9 313 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 CDH10Q9Y6N8 788 aa0.17□□□□□ -2.38
SNORD28-201ENST00000384706 THSD7BQ9C0I4 1608 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PLA2R1Q13018 1463 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PFASO15067 1338 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 KIF7Q2M1P5 1343 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 ITIH6Q6UXX5 1313 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 MAP3K15Q6ZN16 1313 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 COL27A1Q8IZC6 1860 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 USP6P35125 1406 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PPIAL4EA0A075B759 164 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NPIPA5A0A0B4J1W7 369 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TRAV40A0A0B4J280 105 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PPIAL4CA0A0B4J2A2 164 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 A0A0J9YVX5 310 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 IGHV3-64DA0A0J9YX35 117 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 MAGEB16A2A368 324 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PSMB11A5LHX3 300 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 C19orf81C9J6K1 198 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 ZNF878C9JN71 531 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NPIPA5E9PKD4 350 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 E9PLD3 99 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FAM86B1E9PN63 330 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PPIAL4DF5H284 164 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 EI24O14681 340 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CHUKO15111 745 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 BET1O15155 118 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 ZNF264O43296 627 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 RCBTB2O95199 551 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CTDNEP1O95476 244 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 EPOP01588 193 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CSF2P04141 144 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 RPN1P04843 607 aaKnown RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PCCBP05166 539 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FYNP06241 537 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FCER2P06734 321 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PGK2P07205 417 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PLEKP08567 350 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FAM86B2P0C5J1 330 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PPIAL4FP0DN26 164 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 MYBL1P10243 752 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CAPN3P20807 821 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 HNF1AP20823 631 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 VDAC1P21796 283 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 UQCRC2P22695 453 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 IGFBP5P24593 272 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NPY1RP25929 384 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 GDI1P31150 447 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 HOXA9P31269 272 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NNMTP40261 264 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NSFP46459 744 aaKnown RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TFPI2P48307 235 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PSMD8P48556 350 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TKTL1P51854 596 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CLNS1AP54105 237 aaKnown RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 RAG2P55895 527 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PRPS1P60891 318 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 RPS4XP62701 263 aaKnown RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CACNG7P62955 275 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 OTUD4Q01804 1114 aaKnown RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 OC90Q02509 493 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 ZNF85Q03923 595 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 UBXN1Q04323 297 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 FOLH1Q04609 750 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 GABPAQ06546 454 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 SLC3A1Q07837 685 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 OR1C1Q15619 314 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CAMK4Q16566 473 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TAF9Q16594 264 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PRSS8Q16651 343 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 LRRC36Q1X8D7 754 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 CCDC57Q2TAC2 916 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 LY6G6FQ5SQ64 297 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 GPR139Q6DWJ6 353 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 OR5M10Q6IEU7 315 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 GALNT17Q6IS24 598 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 PRR5LQ6MZQ0 368 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 SIGLEC15Q6ZMC9 328 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TMEM182Q6ZP80 229 aaPredicted RBP0.16□□□□□ -2.38
SNORD28-201ENST00000384706 RNF165Q6ZSG1 346 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 LINC00336Q6ZUF6 198 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 TMEM26Q6ZUK4 368 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 NEGR1Q7Z3B1 354 aa0.16□□□□□ -2.38
SNORD28-201ENST00000384706 GPR142Q7Z601 462 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms