RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 CCNYL3P0C7X3 344 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 C8orf89P0DMQ9 161 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 TCEA1P23193 301 aaKnown RBP15.33■□□□□ 0.05
VPS16-203ENST00000380469 ATP5A1P25705 553 aaKnown RBP15.33■□□□□ 0.05
VPS16-203ENST00000380469 GABRA5P31644 462 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 MPIP34949 423 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 TGM3Q08188 693 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 ST3GAL3Q11203 375 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 HYAL2Q12891 473 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 ABHD17CQ6PCB6 329 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 PIGXQ8TBF5 258 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 RFKQ969G6 155 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 KIAA1143Q96AT1 154 aaPredicted RBP15.33■□□□□ 0.05
VPS16-203ENST00000380469 OR7D2Q96RA2 312 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 SNX18Q96RF0 628 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 TM9SF2Q99805 663 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 KATNB1Q9BVA0 655 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 PRDM7Q9NQW5 492 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 MBNL1Q9NR56 388 aaKnown RBP15.33■□□□□ 0.05
VPS16-203ENST00000380469 DPP7Q9UHL4 492 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 SF3B6Q9Y3B4 125 aaKnown RBP15.33■□□□□ 0.05
VPS16-203ENST00000380469 KCNE3Q9Y6H6 103 aa15.33■□□□□ 0.05
VPS16-203ENST00000380469 MYO7AQ13402 2215 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 HMX3A6NHT5 357 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 CPSF4LA6NMK7 179 aaKnown RBP15.33■□□□□ 0.04
VPS16-203ENST00000380469 KDM4EB2RXH2 506 aaPredicted RBP15.33■□□□□ 0.04
VPS16-203ENST00000380469 FAM47E-STBD1D6RA91 191 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 AIFM1O95831 613 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 CSF3P09919 207 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 MLLT1Q03111 559 aaPredicted RBP15.33■□□□□ 0.04
VPS16-203ENST00000380469 DMPKQ09013 629 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 MAP4K2Q12851 820 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 FAM78AQ5JUQ0 283 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 CLEC12AQ5QGZ9 265 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 CACUL1Q86Y37 369 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 FAM20CQ8IXL6 584 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 SMG7Q92540 1137 aaKnown RBP15.33■□□□□ 0.04
VPS16-203ENST00000380469 OSTF1Q92882 214 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 FAM46AQ96IP4 442 aaKnown RBP15.33■□□□□ 0.04
VPS16-203ENST00000380469 ARHGDIGQ99819 225 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 ARHGAP9Q9BRR9 750 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 TRMT61BQ9BVS5 477 aaKnown RBP15.33■□□□□ 0.04
VPS16-203ENST00000380469 MMP28Q9H239 520 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 TRIM45Q9H8W5 580 aaPredicted RBP15.33■□□□□ 0.04
VPS16-203ENST00000380469 MARCH7Q9H992 704 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 KLHL28Q9NXS3 571 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 CNIH4Q9P003 139 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 LIPT1Q9Y234 373 aa15.33■□□□□ 0.04
VPS16-203ENST00000380469 MUC22E2RYF6 1773 aaPredicted RBP15.32■□□□□ 0.04
VPS16-203ENST00000380469 TRAPPC2P0DI81 140 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 TRAPPC2BP0DI82 140 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 PKLRP30613 574 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 FGF9P31371 208 aaPredicted RBP15.32■□□□□ 0.04
VPS16-203ENST00000380469 MRPS15P82914 257 aaKnown RBP15.32■□□□□ 0.04
VPS16-203ENST00000380469 CHRNEQ04844 493 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 MRM1Q6IN84 353 aaKnown RBP15.32■□□□□ 0.04
VPS16-203ENST00000380469 VRK2Q86Y07 508 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 NUP43Q8NFH3 380 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 OR2L5Q8NG80 312 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 OR8D4Q8NGM9 314 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 PAWRQ96IZ0 340 aaKnown RBP15.32■□□□□ 0.04
VPS16-203ENST00000380469 EQTNQ9NQ60 294 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 SEMA4GQ9NTN9 838 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 CLCA2Q9UQC9 943 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 CASKO14936 926 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 POLR1CO15160 346 aaPredicted RBP15.32■□□□□ 0.04
VPS16-203ENST00000380469 FRS3O43559 492 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 AHRP35869 848 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 CDH11P55287 796 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 FABP5Q01469 135 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 DUSP2Q05923 314 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 TMEM44Q2T9K0 475 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 TBRG1Q3YBR2 411 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 C18orf63Q68DL7 685 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 SLC48A1Q6P1K1 146 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 UTS2BQ765I0 119 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 SHFQ7M4L6 423 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 C16orf62Q7Z3J2 963 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 SRFBP1Q8NEF9 429 aaKnown RBP15.32■□□□□ 0.04
VPS16-203ENST00000380469 OR52P1PQ8NH57 321 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 ST6GAL2Q96JF0 529 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 SLC38A1Q9H2H9 487 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 ANKRD19PQ9H560 264 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 C11orf49Q9H6J7 331 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 PHPT1Q9NRX4 125 aaPredicted RBP15.32■□□□□ 0.04
VPS16-203ENST00000380469 KCNK6Q9Y257 313 aa15.32■□□□□ 0.04
VPS16-203ENST00000380469 TRPM6Q9BX84 2022 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 SMIM30A4D0T7 59 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 C4orf51C9J302 202 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 SEC14L5O43304 696 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 LATO43561 262 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 LIMS3P0CW19 117 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 LIMS4P0CW20 117 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 F3P13726 295 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 STAT5AP42229 794 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 ARFIP1P53367 373 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 PPP3R1P63098 170 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 ABATP80404 500 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 SLC35F1Q5T1Q4 408 aa15.31■□□□□ 0.04
VPS16-203ENST00000380469 LHFPL3Q86UP9 236 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms