RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 PDSS2Q86YH6 399 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 C16orf78Q8WTQ4 265 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 MAL2Q969L2 176 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 TOMM40LQ969M1 308 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 ANKRD10Q9NXR5 420 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 SQORQ9Y6N5 450 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 BCL9LQ86UU0 1499 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 MEIS3P1A6NDR6 274 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 G3V3Y1 287 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 TOXO94900 526 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 NR4A2P43354 598 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 ZP2Q05996 745 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 C22orf42Q6IC83 251 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 PIGCQ92535 297 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 OR5B12Q96R08 314 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 LSM5Q9Y4Y9 91 aaKnown RBP13.4□□□□□ -0.26
TRIM13-202ENST00000378182 SLIT2O94813 1529 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 CLN5O75503 358 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 ALDOAP04075 364 aaKnown RBP13.4□□□□□ -0.26
TRIM13-202ENST00000378182 GCGRP47871 477 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 TCTE1Q5JU00 501 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 KIAA1614Q5VZ46 1190 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 RAB2BQ8WUD1 216 aa13.4□□□□□ -0.26
TRIM13-202ENST00000378182 NWD2Q9ULI1 1742 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 CX3CR1P49238 355 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 RAB11BQ15907 218 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 ZNF829Q3KNS6 432 aaPredicted RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 MFSD5Q6N075 450 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 PLBD1Q6P4A8 553 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 CSNK2A3Q8NEV1 391 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 CHPT1Q8WUD6 406 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 KIAA0355O15063 1070 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 RP2O75695 350 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 RGS9O75916 674 aaPredicted RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 BCAS2O75934 225 aaPredicted RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 DDCP20711 480 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 MSR1P21757 451 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 S100A12P80511 92 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 KCNJ11Q14654 390 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 CNIH3Q8TBE1 160 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 USP36Q9P275 1121 aaKnown RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 TIA1P31483 386 aaKnown RBP eCLIP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 STT3AP46977 705 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 GALNT2Q10471 571 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 LRRN1Q6UXK5 716 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 TMEM151AQ8N4L1 468 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 OR9A4Q8NGU2 314 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 SUN5Q8TC36 379 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 ZNF675Q8TD23 568 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 ST6GALNAC4Q9H4F1 302 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 ERVK-19Q9WJR5 959 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 CLIC3O95833 236 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 EMX2Q04743 252 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 PTGR1Q14914 329 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 PTCRAQ6ISU1 281 aaPredicted RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 SLC27A4Q6P1M0 643 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 MOB3CQ70IA8 216 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 FAM46BQ96A09 425 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 HCAR1Q9BXC0 346 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 C12orf49Q9H741 205 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 KLHL42Q9P2K6 505 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 MED1Q15648 1581 aaPredicted RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 DLG5Q8TDM6 1919 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 TSFMP43897 325 aaKnown RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 RRAS2P62070 204 aaPredicted RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 SF3A2Q15428 464 aaKnown RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 HES5Q5TA89 166 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 PLD6Q8N2A8 252 aaKnown RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 C3orf49Q96BT1 292 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 SLC6A16Q9GZN6 736 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 SYNPO2LQ9H987 977 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 DCNP07585 359 aaKnown RBP13.39□□□□□ -0.27
TRIM13-202ENST00000378182 CDKN2DP55273 166 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 DCAF12L1Q5VU92 463 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 SLC2A12Q8TD20 617 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 SULT4A1Q9BR01 284 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 CALHM2Q9HA72 323 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 ERVK13-1Q9NX77 482 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 PLEK2Q9NYT0 353 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 PCDHGA1Q9Y5H4 931 aa13.39□□□□□ -0.27
TRIM13-202ENST00000378182 LRRTM2O43300 516 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 NDUFAF5Q5TEU4 345 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 TPRA1Q86W33 373 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 KLHL13Q9P2N7 655 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 SLC7A7Q9UM01 511 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 HMX3A6NHT5 357 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 TAS2R38P59533 333 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 CRELD2Q6UXH1 353 aaPredicted RBP13.38□□□□□ -0.27
TRIM13-202ENST00000378182 IRF2BP1Q8IU81 584 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 SLC41A3Q96GZ6 507 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 TXNDC15Q96J42 360 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 MFRPQ9BY79 579 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 PCDHGB6Q9Y5F9 930 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 C3P01024 1663 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 SLC22A1O15245 554 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 LILRB3O75022 631 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 SERPINA7P05543 415 aa13.38□□□□□ -0.27
TRIM13-202ENST00000378182 FGL1Q08830 312 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms