RNA–Protein interactions for RNA: ENST00000376919.3

SSX1-201, Transcript of SSX family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX1, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX1-201ENST00000376919 LHX9Q9NQ69 397 aa5.29□□□□□ -1.56
SSX1-201ENST00000376919 GIMAP4Q9NUV9 329 aa5.29□□□□□ -1.56
SSX1-201ENST00000376919 NTMQ9P121 344 aa5.29□□□□□ -1.56
SSX1-201ENST00000376919 LGALS13Q9UHV8 139 aa5.29□□□□□ -1.56
SSX1-201ENST00000376919 PTBP2Q9UKA9 531 aaKnown RBP5.29□□□□□ -1.56
SSX1-201ENST00000376919 PILRAQ9UKJ1 303 aa5.29□□□□□ -1.56
SSX1-201ENST00000376919 CCL27Q9Y4X3 112 aa5.29□□□□□ -1.56
SSX1-201ENST00000376919 TMEM184BQ9Y519 407 aaPredicted RBP5.29□□□□□ -1.56
SSX1-201ENST00000376919 FREM2Q5SZK8 3169 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SDK2Q58EX2 2172 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 A0A0A6YYC8 382 aaPredicted RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 LOC101059948A0A1B0GTJ6 334 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ARHGAP10A1A4S6 786 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ZNF860A6NHJ4 632 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SRRM3A6NNA2 597 aaPredicted RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 A8MVJ9 347 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 C21orf140B9A014 251 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 I3L1I5 382 aaPredicted RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 E2F3O00716 465 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 FFAR3O14843 346 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 LDLRAD4O15165 306 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 GPR42O15529 346 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 P2RX6O15547 441 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ERI3O43414 337 aaKnown RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 HCRTR1O43613 425 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 TRIAP1O43715 76 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SH3BGRLO75368 114 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 CLDN9O95484 217 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 CD63P08962 238 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SPTBP11277 2137 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 CPA3P15088 417 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 IL1RNP18510 177 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 TSPAN8P19075 237 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ITPKBP27987 946 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 GSTM2P28161 218 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SERPINB1P30740 379 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 OTX2P32243 289 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 AHRP35869 848 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ATP6V1E1P36543 226 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SSR2P43308 183 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 OR1D4P47884 311 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 CDH13P55290 713 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 FOXL2P58012 376 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 RPS18P62269 152 aaKnown RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 HERVK_113P63132 956 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 EFNB1P98172 346 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 DOC2AQ14183 400 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SSPNQ14714 243 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 HLXQ14774 488 aaPredicted RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 HERC3Q15034 1050 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 NCF4Q15080 339 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 IMPG1Q17R60 797 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 NKAIN1Q4KMZ8 207 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SGO1Q5FBB7 561 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 HHATQ5VTY9 493 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 LIPJQ5W064 366 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 GRHL2Q6ISB3 625 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 NIPAL1Q6NVV3 410 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 METTL2BQ6P1Q9 378 aaKnown RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 PRMT9Q6P2P2 845 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 FAM199XQ6PEV8 388 aaPredicted RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 C19orf48Q6RUI8 117 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ZYG11AQ6WRX3 759 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 TIPARPQ7Z3E1 657 aaKnown RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 RAB43Q86YS6 212 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 P3H2Q8IVL5 708 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 KLHDC8AQ8IYD2 350 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 PRSS58Q8IYP2 241 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 FAM109AQ8N4B1 249 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ENDOVQ8N8Q3 282 aaKnown RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 POC5Q8NA72 575 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 POGLUT1Q8NBL1 392 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 TMEM116Q8NCL8 245 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ZNF740Q8NDX6 193 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ABHD11Q8NFV4 315 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 OR8H1Q8NGG4 311 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 MGARPQ8TDB4 240 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 TCP10LQ8TDR4 215 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 TRPC4APQ8TEL6 797 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 VPS33AQ96AX1 596 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 MIEF2Q96C03 454 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 VPS50Q96JG6 964 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 LRFN5Q96NI6 719 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 FAM111AQ96PZ2 611 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 TMEM237Q96Q45 408 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 OR2A5Q96R48 311 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 MACROD1Q9BQ69 325 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ERVK-6Q9BXR3 956 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SPNS1Q9H2V7 528 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 RHBGQ9H310 441 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 EHD1Q9H4M9 534 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ACTL8Q9H568 366 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 CPNE5Q9HCH3 593 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 DECR2Q9NUI1 292 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 NKIRAS1Q9NYS0 192 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 TRPC4Q9UBN4 977 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 ZNF282Q9UDV7 671 aaPredicted RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 NXT1Q9UKK6 140 aaKnown RBP5.28□□□□□ -1.56
SSX1-201ENST00000376919 PCTPQ9UKL6 214 aa5.28□□□□□ -1.56
SSX1-201ENST00000376919 SNX6Q9UNH7 406 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms