RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 GPR55Q9Y2T6 319 aaPredicted RBP18.94■□□□□ 0.62
VSX1-202ENST00000376709 CPSF4LA6NMK7 179 aaKnown RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 ZSCAN9O15535 394 aaPredicted RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 AGR2O95994 175 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 CELA2BP08218 269 aaPredicted RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 PIPP12273 146 aaPredicted RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 ALDH6A1Q02252 535 aaKnown RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 ATP1A4Q13733 1029 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 CCDC85BQ15834 202 aaPredicted RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 CDC73Q6P1J9 531 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 C1orf94Q6P1W5 598 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 TMEFF1Q8IYR6 380 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 OR2L13Q8N349 312 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 OR52P1PQ8NH57 321 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 BAHD1Q8TBE0 780 aaPredicted RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 SNRNP27Q8WVK2 155 aaKnown RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 S100ZQ8WXG8 99 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 ARHGDIGQ99819 225 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 CACYBPQ9HB71 228 aaKnown RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 SLC25A19Q9HC21 320 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 AKIP1Q9NQ31 210 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 TMEM74BQ9NUR3 256 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 EVA1BQ9NVM1 165 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 C2orf42Q9NWW7 574 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 TVP23BQ9NYZ1 205 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 NTMQ9P121 344 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 MKLN1Q9UL63 735 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 MRPS2Q9Y399 296 aaKnown RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 SPACA6W5XKT8 324 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 KIR2DS5A0A0G2JLQ3 304 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 A0A0G2JNG1 304 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 LOC100506127A0A0U1RQW1 187 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 KIR2DS3K7RE56 304 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 TP53P04637 393 aaPredicted RBP18.93■□□□□ 0.62
VSX1-202ENST00000376709 CPMP14384 443 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 ZNF12P17014 697 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 IFNA8P32881 189 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 SLC15A1P46059 708 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 LSSP48449 732 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 RGS6P49758 472 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 ID2Q02363 134 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 KIR2DS5Q14953 304 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 KIAA0895LQ68EN5 471 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 OSGIN1Q9UJX0 560 aa18.93■□□□□ 0.62
VSX1-202ENST00000376709 A0A0J9YY10 115 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 FAM221BA6H8Z2 402 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 CYP7B1O75881 506 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 CCNYL3P0C7X3 344 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 CTSEP14091 401 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 PORP16435 677 aaPredicted RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 PRKAR1BP31321 381 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 PSMD7P51665 324 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 UBE2IP63279 158 aaKnown RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 TUBA1BP68363 451 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 ITGADQ13349 1161 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 TMEM201Q5SNT2 666 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 HEPHL1Q6MZM0 1159 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 DCDC5Q6ZRR9 648 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 USP53Q70EK8 1073 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 TUBA1AQ71U36 451 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 PRSS41Q7RTY9 318 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 ZNF761Q86XN6 746 aaPredicted RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 SIMC1Q8NDZ2 872 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 NR4A3Q92570 626 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 OR5M11Q96RB7 305 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 PHF7Q9BWX1 381 aaPredicted RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 SLIRPQ9GZT3 109 aaKnown RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 LYRM4Q9HD34 91 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 PTGFRNQ9P2B2 879 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 IFT52Q9Y366 437 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 OR5K4A6NMS3 321 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 ZIC2O95409 532 aaPredicted RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 ADRA2AP08913 450 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 THEGLP0DJG4 465 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 GSTM3P21266 225 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 EIF2B5Q13144 721 aaKnown RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 GINS1Q14691 196 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 RRM2BQ7LG56 351 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 CENPSQ8N2Z9 138 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 GPA33Q99795 319 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 GPR174Q9BXC1 333 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 UBE2ZQ9H832 354 aaPredicted RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 ERGIC3Q9Y282 383 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 B3GNT3Q9Y2A9 372 aa18.92■□□□□ 0.62
VSX1-202ENST00000376709 RPL36Q9Y3U8 105 aaKnown RBP18.92■□□□□ 0.62
VSX1-202ENST00000376709 A0A087WUU8 490 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 SPTY2D1-AS1A0A0U1RR47 76 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 C10orf142B7Z368 130 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 TLX2O43763 284 aaPredicted RBP18.91■□□□□ 0.62
VSX1-202ENST00000376709 LDB3O75112 727 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 IFNGR2P38484 337 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 CCR5P51681 352 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 RGS8P57771 180 aaPredicted RBP18.91■□□□□ 0.62
VSX1-202ENST00000376709 RELAQ04206 551 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 ST3GAL3Q11203 375 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 TRAM2Q15035 370 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 ZNF730Q6ZMV8 503 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 FRRS1Q6ZNA5 592 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 USP43Q70EL4 1123 aa18.91■□□□□ 0.62
VSX1-202ENST00000376709 RSC1A1Q92681 617 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms