RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 RNF165Q6ZSG1 346 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 NEGR1Q7Z3B1 354 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 WDR49Q8IV35 697 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 OR6X1Q8NH79 312 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 HEXDCQ8WVB3 486 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 DNAJA4Q8WW22 397 aaPredicted RBP0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 STARD8Q92502 1023 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 FRZBQ92765 325 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 RIT1Q92963 219 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 C5orf30Q96GV9 206 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 CPXM1Q96SM3 734 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 ATG101Q9BSB4 218 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 DCTPP1Q9H773 170 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 SLC25A19Q9HC21 320 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 SH2D2AQ9NP31 389 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 ARMCX3Q9UH62 379 aaPredicted RBP0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 AHNAK2Q8IVF2 5795 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 PLA2R1Q13018 1463 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 THSD7BQ9C0I4 1608 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 TRBV7-9A0A0J9YWB2 115 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 YDJCA8MPS7 323 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 C11orf98E9PRG8 122 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 EFNA2O43921 213 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 PNPP00491 289 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 HMGB1P09429 215 aaKnown RBP0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 CISD3P0C7P0 127 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 NSFP46459 744 aaKnown RBP0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 ZNF273Q14593 569 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 IGFBP7Q16270 282 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 SPATA18Q8TC71 538 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 RNF185Q96GF1 192 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 IDI2Q9BXS1 227 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 TECRQ9NZ01 308 aaKnown RBP0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 TEKT2Q9UIF3 430 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 GPR34Q9UPC5 381 aa0.6□□□□□ -2.31
RNU6-238P-201ENST00000363313 ANKRD30BQ9BXX2 1392 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 USP6P35125 1406 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 C5orf52A6NGY3 159 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 J3QKU1 62 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 ZNF254O75437 659 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 EPOP01588 193 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 IGHV3-48P01763 117 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 CT45A8P0DMV1 189 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 CT45A9P0DMV2 189 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 HNF1AP20823 631 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 CPT2P23786 658 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 ROR1Q01973 937 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 IL18R1Q13478 541 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 SMC1AQ14683 1233 aaKnown RBP0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 TAF9Q16594 264 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 CT45A2Q5DJT8 189 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 ATRAIDQ6UW56 229 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 DNAJB7Q7Z6W7 309 aaPredicted RBP0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 LINC00518Q8N0U6 118 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 RASL10BQ96S79 203 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 AGPAT1Q99943 283 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 ZNF559Q9BR84 538 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 FEM1AQ9BSK4 669 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 INPP5KQ9BT40 448 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 FUT8Q9BYC5 575 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 TSPY26PQ9H489 355 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 NARFLQ9H6Q4 476 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 BCCIPQ9P287 314 aaKnown RBP eCLIP0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 RPS6KA6Q9UK32 745 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 SLC9A8Q9Y2E8 581 aa0.59□□□□□ -2.31
RNU6-238P-201ENST00000363313 LTBP4Q8N2S1 1624 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 A8MUA0 341 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 PDLIM1O00151 329 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 PRDX3P30048 256 aaKnown RBP0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 DLSTP36957 453 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 PTGDSP41222 190 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 CCR6P51684 374 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 PTENP60484 403 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 HYAL4Q2M3T9 481 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 DEFB116Q30KQ4 102 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 CFAP221Q4G0U5 840 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 SHEQ5VZ18 495 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 ITPRIPL1Q6GPH6 555 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 OR52W1Q6IF63 320 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 PPP1R21Q6ZMI0 780 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 ADAMTSL5Q6ZMM2 481 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 ERN2Q76MJ5 926 aaKnown RBP0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 PRSS48Q7RTY5 328 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 ADCK2Q7Z695 626 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 CSNK1A1LQ8N752 337 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 PGAP3Q96FM1 320 aaPredicted RBP0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 COQ7Q99807 217 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 TM2D1Q9BX74 207 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 FAM212BQ9NTI7 297 aaPredicted RBP0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 DCDC2Q9UHG0 476 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 TP53TG5Q9Y2B4 290 aa0.58□□□□□ -2.32
RNU6-238P-201ENST00000363313 MAGEB16A2A368 324 aa0.57□□□□□ -2.32
RNU6-238P-201ENST00000363313 TSPY2A6NKD2 308 aa0.57□□□□□ -2.32
RNU6-238P-201ENST00000363313 GJE1A6NN92 205 aa0.57□□□□□ -2.32
RNU6-238P-201ENST00000363313 EI24O14681 340 aa0.57□□□□□ -2.32
RNU6-238P-201ENST00000363313 RPN1P04843 607 aaKnown RBP0.57□□□□□ -2.32
RNU6-238P-201ENST00000363313 MUC1P15941 1255 aaPredicted RBP0.57□□□□□ -2.32
RNU6-238P-201ENST00000363313 LBPP18428 481 aa0.57□□□□□ -2.32
RNU6-238P-201ENST00000363313 HAND2P61296 217 aa0.57□□□□□ -2.32
RNU6-238P-201ENST00000363313 ACTA2P62736 377 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms