RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 Q6ZVL8 140 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 SLC7A13Q8TCU3 470 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 OPA3Q9H6K4 179 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 A0A087WUU8 490 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 IL4RP24394 825 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 CTC1Q2NKJ3 1217 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 C6orf141Q5SZD1 244 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 GDPGP1Q6ZNW5 385 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 SLC45A3Q96JT2 553 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 GPATCH2Q9NW75 528 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 NR0B2Q15466 257 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 FMO6PO60774 539 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 TP53P04637 393 aaPredicted RBP9.22□□□□□ -0.93
CUX1-203ENST00000360264 GALNT10Q86SR1 603 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 SPO11Q9Y5K1 396 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 SYT7O43581 403 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 IL1R2P27930 398 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 MEF2AQ02078 507 aaPredicted RBP9.22□□□□□ -0.93
CUX1-203ENST00000360264 C6orf136Q5SQH8 315 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 TMEM173Q86WV6 379 aaPredicted RBP9.22□□□□□ -0.93
CUX1-203ENST00000360264 NAXEQ8NCW5 288 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 OR6C4Q8NGE1 309 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 SFXN2Q96NB2 322 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 DPH7Q9BTV6 452 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 KIF25Q9UIL4 384 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 GLOD5A6NK44 160 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 FZD9O00144 591 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 PEX10O60683 326 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 OPN1SWP03999 348 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 ICAM2P13598 275 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 EXOC3L2Q2M3D2 409 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 PHOX2BQ99453 314 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 ABCC6O95255 1503 aa9.22□□□□□ -0.93
CUX1-203ENST00000360264 hCG_1809904A0A1W2PP81 198 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 A0A1W2PPE2 198 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 A0A1W2PR64 198 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 A0A1W2PRV1 198 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 IGLON5A6NGN9 336 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 ETV3P41162 512 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 LRP8Q14114 963 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 LILRB2Q8N423 598 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 SPHK2Q9NRA0 654 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 LRFN1Q9P244 771 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 SCAF4O95104 1147 aaKnown RBP9.21□□□□□ -0.93
CUX1-203ENST00000360264 RAB8AP61006 207 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 GPR50Q13585 617 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 RSC1A1Q92681 617 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 CLEC4EQ9ULY5 219 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 IRS2Q9Y4H2 1338 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 ETFAP13804 333 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 POU3F4P49335 361 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 OGDHQ02218 1023 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 SLC25A11Q02978 314 aaKnown RBP9.21□□□□□ -0.93
CUX1-203ENST00000360264 ZNF92Q03936 586 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 NPRL3Q12980 569 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 LEG1Q6P5S2 330 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 POGLUT1Q8NBL1 392 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 OR51T1Q8NGJ9 327 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 IL21RQ9HBE5 538 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 PRELID1Q9Y255 219 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 PIAS3Q9Y6X2 628 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 NAA10P41227 235 aaPredicted RBP9.21□□□□□ -0.93
CUX1-203ENST00000360264 ARL11Q969Q4 196 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 IL20RAQ9UHF4 553 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 ERVK-19Q9WJR5 959 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 CASC3O15234 703 aaKnown RBP9.21□□□□□ -0.93
CUX1-203ENST00000360264 SLC9A3P48764 834 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 DCAF7P61962 342 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 CYP27C1Q4G0S4 372 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 NANOGP8Q6NSW7 305 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 UCN3Q969E3 161 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 NANOGQ9H9S0 305 aa9.21□□□□□ -0.93
CUX1-203ENST00000360264 INMT-MINDY4F8WBC2 141 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 TULP2O00295 520 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 MRPL3P09001 348 aaKnown RBP9.21□□□□□ -0.94
CUX1-203ENST00000360264 NR0B1P51843 470 aaKnown RBP9.21□□□□□ -0.94
CUX1-203ENST00000360264 CLDN8P56748 225 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 NAT6Q93015 286 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 LIN37Q96GY3 246 aaPredicted RBP9.21□□□□□ -0.94
CUX1-203ENST00000360264 NOTOA8MTQ0 251 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 PRAMEF26H0Y7S4 382 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 TPT1P13693 172 aaKnown RBP9.21□□□□□ -0.94
CUX1-203ENST00000360264 AARDQ4LEZ3 155 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 RNASE10Q5GAN6 216 aaKnown RBP9.21□□□□□ -0.94
CUX1-203ENST00000360264 PRRT1Q99946 306 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 TMEM185BQ9H7F4 350 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 IL23AQ9NPF7 189 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 ZNF705EA8MWA4 302 aaPredicted RBP9.21□□□□□ -0.94
CUX1-203ENST00000360264 SSX4O60224 188 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 SLC34A2O95436 690 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 PAK4O96013 591 aaPredicted RBP9.21□□□□□ -0.94
CUX1-203ENST00000360264 HLA-EP13747 358 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 TAS2R46P59540 309 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 IFNA17P01571 189 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 CD79AP11912 226 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 KRTCAP2Q8N6L1 136 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 OR2B2Q9GZK3 357 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 OR1A2Q9Y585 309 aa9.21□□□□□ -0.94
CUX1-203ENST00000360264 TIMM8BQ9Y5J9 83 aaPredicted RBP9.21□□□□□ -0.94
CUX1-203ENST00000360264 TMEM139Q8IV31 216 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms