RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 GPIP06744 558 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 ANXA4P09525 319 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 IFI6P09912 130 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 UMPSP11172 480 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 PCNAP12004 261 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 FCGR1AP12314 374 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 HOXB9P17482 250 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 IL1RNP18510 177 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 ZNF10P21506 573 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 IL12AP29459 219 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 S100A3P33764 101 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 NEK2P51955 445 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SLC7A2P52569 658 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 RPS13P62277 151 aaKnown RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 HEPACAMQ14CZ8 416 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 MLC1Q15049 377 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 ZIC1Q15915 447 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 CMPK2Q5EBM0 449 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SGO1Q5FBB7 561 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SPANXN4Q5MJ08 99 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 CPTPQ5TA50 214 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 DUS1LQ6P1R4 473 aaKnown RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 ERICH5Q6P6B1 374 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SCIMPQ6UWF3 145 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 DLEU7Q6UYE1 221 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 TMEM26Q6ZUK4 368 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 FKBP9P1Q75LS8 142 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 PRSS42Q7Z5A4 293 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SERPINA11Q86U17 422 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 PAQR7Q86WK9 346 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 OOSP2Q86WS3 158 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 PPP1R3BQ86XI6 285 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SLC15A3Q8IY34 581 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SAMD14Q8IZD0 417 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 ADGRF3Q8IZF5 1079 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 C1orf52Q8N6N3 182 aaKnown RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 TRIML2Q8N7C3 387 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 NT5CQ8TCD5 201 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 DVL3Q92997 716 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 TMEM125Q96AQ2 219 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 RGMAQ96B86 450 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 IL17FQ96PD4 163 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 OR52E6Q96RD3 313 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 CD180Q99467 661 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 TBCDQ9BTW9 1192 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 RAD21L1Q9H4I0 556 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 REEP4Q9H6H4 257 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 CLK4Q9HAZ1 481 aaKnown RBP6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SERHLQ9NQF3 203 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 GPR83Q9NYM4 423 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 ADA2Q9NZK5 511 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 ACTR3BQ9P1U1 418 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 GIMAP2Q9UG22 337 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 BAIAP2L1Q9UHR4 511 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 B3GNT3Q9Y2A9 372 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 NTNG1Q9Y2I2 539 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 SNX13Q9Y5W8 968 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 CCDC168Q8NDH2 2452 aa6.51□□□□□ -1.37
VPS13A-201ENST00000355766 PCNX1Q96RV3 2341 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 IGKV1-8A0A0C4DH67 115 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 PRSS51A0A1B0GVH4 220 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 GNG14A0A1W2PPG7 69 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 TCRBV3S1A0A5B6 114 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 KRT87PA6NCN2 255 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 PRORSD1PA6NEY8 169 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 FAM220BPB1ANY3 271 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 NME4O00746 187 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 TXNDC9O14530 226 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 CASQ2O14958 399 aaPredicted RBP6.5□□□□□ -1.37
VPS13A-201ENST00000355766 ZSCAN9O15535 394 aaPredicted RBP6.5□□□□□ -1.37
VPS13A-201ENST00000355766 NDUFS4O43181 175 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 ETHE1O95571 254 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 SLC35G6P0C7Q6 338 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 COX7A2P14406 83 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 DDCP20711 480 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 PTPN6P29350 595 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 PEBP1P30086 187 aaKnown RBP6.5□□□□□ -1.37
VPS13A-201ENST00000355766 HNRNPH1P31943 449 aaKnown RBP6.5□□□□□ -1.37
VPS13A-201ENST00000355766 GRIA3P42263 894 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 CAPZBP47756 277 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 RPS15P62841 145 aaKnown RBP6.5□□□□□ -1.37
VPS13A-201ENST00000355766 SKP1P63208 163 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 RAE1P78406 368 aaKnown RBP6.5□□□□□ -1.37
VPS13A-201ENST00000355766 SLC34A1Q06495 639 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 KLC1Q07866 573 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 RGS1Q08116 209 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 DDX39BQ13838 428 aaKnown RBP6.5□□□□□ -1.37
VPS13A-201ENST00000355766 GPR18Q14330 331 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 RCN1Q15293 331 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 CRB2Q5IJ48 1285 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 C6orf10Q5SRN2 563 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 FAM71E1Q6IPT2 247 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 NANOGP8Q6NSW7 305 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 SPESP1Q6UW49 350 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 RNF44Q7L0R7 432 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 DHFR2Q86XF0 187 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 ANKRD53Q8N9V6 530 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 CATSPER1Q8NEC5 780 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 C7orf57Q8NEG2 295 aa6.5□□□□□ -1.37
VPS13A-201ENST00000355766 OR2L5Q8NG80 312 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms